Fervidicoccus fontis: FFONT_1166
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Entry
FFONT_1166 CDS
T01936
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ffo
Fervidicoccus fontis
Pathway
ffo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ffo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FFONT_1166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffo03019
]
FFONT_1166
03009 Ribosome biogenesis [BR:
ffo03009
]
FFONT_1166
04131 Membrane trafficking [BR:
ffo04131
]
FFONT_1166
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ffo04147
]
FFONT_1166
Messenger RNA biogenesis [BR:
ffo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FFONT_1166
Ribosome biogenesis [BR:
ffo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FFONT_1166
Membrane trafficking [BR:
ffo04131
]
SNARE
SNARE associated proteins
Others
FFONT_1166
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FFONT_1166
Exosome [BR:
ffo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FFONT_1166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
TIP49
CDC48_2
AAA_2
AAA_22
AAA_33
AAA_14
AAA_28
nSTAND3
Mg_chelatase
IstB_IS21
RNA_helicase
Vps4_C
Parvo_NS1
NPHP3_N
AAA_25
AAA_18
ABC_tran
DUF815
AAA_24
AAA_7
NACHT
AAA_30
Sigma54_activat
ATPase
AAA_3
AAA_lid_PRS2_C
TsaE
ATPase_2
PhoH
AAA_17
Sigma54_activ_2
Zeta_toxin
AAA_19
SLFN-g3_helicase
bpMoxR
Bac_DnaA
AFG1_ATPase
AAA_6
ATP-synt_ab
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
AFH43154
UniProt:
I0A2E7
LinkDB
All DBs
Position
1110755..1112944
Genome browser
AA seq
729 aa
AA seq
DB search
MSEEVRAIVAEAKSRDVGKKRARVSFRLMSKLGVTSGDFIEIEGRKGTTLVQVWPAYPED
EDKDYIRIDGVIRNAIGVSVGETVTIRKAEASPATKIVLAPTGIEGKLSKDYVEYFENLL
KEELSGKPLKRGETIIVPLSFFGSELTFVVTNTQPTTNVFVTSSTEIQVREEPVKEGEIV
GEIPKVTWEDIGDLEEAKRRLREIVELPMRQPQLFRHLGIEPPKGVLLYGPPGTGKTLLA
KALANEIGAYFVAINGPEIMSKFYGESEQRLREIFQQAQENAPAIIFIDEIDSIAPKREE
VTGEVERRVVAQLLTLMDGLKERGRVVVIGATNRPDALDPALRRPGRFDREIEIAPPDVK
ARKEILMVHTRNVPLAEDVDLDKLAAITHGFTGADLAALVKEAAMNTIRRFIEEKKVDLD
KPIKPELLKDVKVTWSDFMNALKDVNPSLIREIYVEVPNVKWSDIGGLEEAKQQLREAVE
WPLKYPEIYEKMGVRPPRGVLLFGPPGTGKTMLAKAVATESEANFIAVRGPEVLSKWVGE
SEKAIREIFRRARQVAPTVIFFDEIDSITPARGLRYDSSGVTDRIVNQLLTEIDGIQPLS
NVVVIGATNRPDILDPALLRPGRFDRLVYIPPPDKKSRLDILKIHTRKVPLASDVDLEKL
ADMTEGYTGADLEALVREAVMLALREKLEARPVEFKYFLKAMETVGPSLTREEVEKYERL
AKQLKKMTI
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaagttagagctattgtagcagaagcaaaatcaagagatgtcggtaagaaa
agggctagggtttcatttaggttaatgagcaaactaggagttacttctggagactttatt
gaaatagaaggtagaaaaggaactacattagttcaagtttggcctgcttacccagaagat
gaagataaggattatatcagaattgatggtgtaataaggaatgcgataggtgttagcgtt
ggtgagactgtaacaattagaaaggcagaagcatctccggcaacaaagatagtgttggca
cctactggtatagaaggcaagcttagtaaggattatgtagaatactttgaaaacttactt
aaagaggagcttagcgggaaacctctgaagagaggcgaaacgatcatcgttccgctttca
ttctttggctctgagcttacatttgttgttactaatacacaacccacaacaaatgtcttt
gttacaagttctacagaaattcaagtaagagaagagccggtgaaggagggagaaatagta
ggagaaattcctaaagttacttgggaggacatcggagatttagaagaagccaaaaggagg
ctaagggaaattgtagaacttcccatgaggcaaccacaactatttaggcatttaggtata
gagcctcccaaaggagttctactctatggacctccaggaaccggaaaaaccttactcgca
aaagcattggcaaatgaaattggagcctactttgtagcaataaatggtcctgagattatg
agcaagttctacggagagagtgaacagaggctgagggaaatattccagcaagcacaggaa
aatgcacctgccataatatttattgatgaaattgacagtattgcaccaaaaagagaggaa
gtcaccggtgaagtggaaagaagggtcgtcgctcaattgttaacgcttatggatggtctg
aaggaaagaggaagagttgttgttattggagctacaaacagaccagatgcgctcgatcca
gctttaagaagaccgggaaggtttgatagagaaatagaaatcgcccctccagatgttaaa
gccagaaaagaaatattaatggttcatacaagaaacgttccattggctgaagatgtcgat
cttgataagctcgctgctataactcatggatttaccggagcagatcttgctgctttagta
aaagaggcagcaatgaatactattaggaggtttatcgaagagaaaaaagtagatttggac
aagccgattaagcctgagcttttgaaagatgtaaaggtcacatggagcgattttatgaat
gcgcttaaagatgtgaatccgtcgcttattagagaaatatatgtagaggttccaaatgtt
aagtggagcgatataggtgggcttgaagaggcaaaacagcagctgagagaggcagttgag
tggcctctcaagtaccctgagatatatgaaaaaatgggagtaagacctccaagaggcgta
ttactctttggacctcctggtactgggaaaacgatgctcgctaaggctgttgcaactgag
agcgaggcgaactttatagcagtcagaggtccagaggtgttgagcaagtgggttggagag
agtgagaaagctataagggaaatattcaggagagcaagacaggtcgctccgactgtcatc
ttctttgatgaaattgattcaattactcctgcaagaggattaaggtatgattcttctgga
gtgacagataggattgtcaatcaattacttacggaaattgacggaatacaacctctttca
aacgttgttgttattggagctacaaacagaccagacatactagatcctgctctattaaga
ccgggaaggtttgatagattggtgtatattcctccgccagacaaaaagtcgaggttagac
atattaaaaatacatacgagaaaagttcctcttgcaagtgatgtagatttagaaaagctg
gcagacatgactgaaggctacactggcgcagatctggaagctttagttagagaagcagtg
atgctcgctcttagggaaaaacttgaagctagacctgttgagttcaaatacttccttaag
gccatggagactgtaggaccatcgctgactagagaagaagtagaaaagtatgagaggctg
gcaaagcagcttaaaaaaatgacgatctga
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