Fervidicoccus fontis: FFONT_1230
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Entry
FFONT_1230 CDS
T01936
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ffo
Fervidicoccus fontis
Pathway
ffo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ffo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FFONT_1230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffo03021
]
FFONT_1230
Transcription machinery [BR:
ffo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FFONT_1230
Prokaryotic type
Archaeal type
TFB
FFONT_1230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
FAM186A-B_C
Motif
Other DBs
NCBI-ProteinID:
AFH43218
UniProt:
I0A2L1
LinkDB
All DBs
Position
complement(1174960..1175859)
Genome browser
AA seq
299 aa
AA seq
DB search
MSDESSENKINCQHTIADMERGELICLDTGEVISTIIDSGPEWRDFSSQAERSRSRAGTP
LTFRMHDHGLTTYTSESDIKKLPFRKRRKFIELKRKNTAIRMSKNKRMVKALQILNDEAR
KLGLPQKVTETAAYYIKKVVEKGLGRGEMIRAYVAASLFMACRLMKVPRTFYSVIISVGA
DEEKVRYAQRKIVEIQGGKINAKVTKPKDYIPMITSKLGLSMQSENLMYRLANAIEKLNM
DHGKSPIALAAATAYIASSIFGEKKNQKDIASALGNFTDVAIRNRYREIIDKLYIEVNL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgaaagtagcgagaataaaataaactgtcaacatacaatagctgatatggaa
agaggagaattaatttgtcttgatacaggtgaagtgataagtactataattgattctgga
ccagaatggagggatttcagctctcaagcagaaagatctaggtcaagagcaggcacacca
ttaacatttaggatgcacgatcacggactaactacttacactagcgaaagtgacataaaa
aagctaccattcagaaaaagaaggaaatttattgagttgaaaaggaaaaatacagcgata
aggatgagtaaaaataaacgaatggtaaaggcgcttcaaattttgaatgatgaagctaga
aagttggggcttcctcaaaaagtaacagaaactgcagcctattacataaaaaaagttgtg
gaaaagggtcttggaagaggagagatgataagagcatatgttgcagcttcgttgtttatg
gcatgtagacttatgaaggtaccgagaacgttttattctgtaattatcagcgtaggggct
gatgaagaaaaagtaaggtacgcacagagaaaaatagttgaaatacagggaggaaaaatt
aatgcaaaagtcactaagccaaaagattatattccaatgataacttccaagttaggacta
tcaatgcagtctgaaaacctaatgtacagactcgcgaatgctatagaaaagcttaacatg
gatcacggaaagtccccaatagcccttgcagctgctacagcatatatcgcttcatctatc
tttggcgaaaaaaagaaccaaaaagatattgcatcagctttaggtaattttactgatgtt
gcgatcagaaacagatatagagaaattattgacaaattatatatagaagttaatttatga
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