Fervidicoccus fontis: FFONT_1369
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Entry
FFONT_1369 CDS
T01936
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
ffo
Fervidicoccus fontis
Brite
KEGG Orthology (KO) [BR:
ffo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffo03400
]
FFONT_1369
Enzymes [BR:
ffo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FFONT_1369
DNA repair and recombination proteins [BR:
ffo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
FFONT_1369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
Helicase_C
HHH_5
ResIII
HHH_2
HTH_61
HHH
DNA_pol_lambd_f
DEXQc_Suv3
HHH_3
Cdd1
POLQ_helical
Cas3-like_C_2
HTH_45
UPF0758_N
DUF5407
Motif
Other DBs
NCBI-ProteinID:
AFH43357
UniProt:
I0A300
LinkDB
All DBs
Position
complement(1300805..1302931)
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AA seq
708 aa
AA seq
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MEISEAPFHPVVKRLCAMKGMKSFYPPQEEAIRKGILDGKNVLMVTQTASGKTFLAELIA
VNNVLSGRGKTVYLTPLKALAIEKYSDFIEYERIGIRTIATMGDYDSSEPMLERYDIIVA
TYEKMDSILRHRPSWLSRVSLVIIDEIHYLDDEKRGPVLESLIAKLKSMKSDAQILGLSA
TVGNPEEISSWLDAELVLSSWRPIPLKEGVYYRGKIKFSDGEEKKISEPFSSPVLDLIND
VISDGGQAIVFVNSRRRAVSLAQTVAKRLKMNKSSEAEELSKLIIESSEVQSLNEVLSEM
IKNRVSFHHAGLTVEQRRMIEEGFRKGAINVIVATPTLAAGVNLPARRVIIESSERYVAG
EGNSPIKVLEYKQFAGRAGRPGYDEYGEAILIAGDPVEVREMFSQYINGKPESIYSKMGS
SSAFRSHLLSYIATLEKLRLEDIRGFVKNTLYSRQMSQESAKKLLSDSLRFLKEKGFIEE
EGKYYKATSYGKYVSDLYIDPLSAELVKEAFSKKKRATDFSIMHIIAATPDMPKLSLKKK
EFAKIDAAFVELIPEILLGLEDRDVSYEDILSEVKTALFLYDWINEVPEQEICEKYDLGP
GDVYSFIESAAWIAYAIYKLSDVLEQAKQYSKKLEALSYRVKYGIKEELYELVSIPEIGR
VRARNLYSSGFRSIEDIRKASVNELMRVRGIGERLAYRIKEYALKHSD
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttctgaagcgccttttcatcctgtagttaaaaggctttgtgccatgaaggga
atgaagagtttttaccctccgcaggaggaggccatcagaaagggcatactcgacgggaaa
aacgtactcatggtcacgcagaccgcttcaggtaagactttcctggccgagctcatcgcc
gtgaacaatgttctgagcgggagggggaaaaccgtatatcttacccctcttaaagccctc
gcaattgaaaagtatagcgacttcatagaatatgagagaataggaataaggactatcgcg
actatgggggattacgactcctctgagcccatgcttgagaggtatgacataattgtagct
acatatgagaagatggacagcatcttaaggcacaggccttcatggctcagcagggtgtct
ctggtaataattgacgagatacattacctcgatgacgagaagaggggacctgtgctcgag
agcttgatagctaaactgaagagcatgaagagcgacgcccaaatactcgggctcagcgct
acggttgggaaccctgaggagataagctcgtggctcgacgctgaactggttctgagcagc
tggaggccgattccgctgaaggagggagtttactatagggggaagataaagttcagcgat
ggagaggagaagaagataagcgagcctttctcaagccccgtcttggatttgatcaacgat
gttataagcgatggaggtcaggctatagtcttcgtgaacagcaggaggagggctgtttcc
cttgcacaaacggttgcaaagagattgaagatgaataaatcgagcgaggcggaggagctt
tcaaagctcattatagagtcgagcgaggttcaatcgctcaatgaagttctgagcgaaatg
atcaagaacagggtctcattccaccatgcaggattgacggttgagcagaggaggatgatt
gaggagggcttcaggaaaggtgcaataaatgtaattgttgcaactccaactctcgcggct
ggtgtgaaccttcctgctaggagggtcataatagagagctctgagagatatgtagctggc
gaggggaactctccaataaaggtcctagaatacaagcagttcgctggaagggcggggaga
cctggatacgacgaatacggagaggctatactcattgctggggatcccgttgaggtcagg
gagatgttctctcaatatattaatggaaagccggagagcatatattcaaaaatgggatcc
tcctccgctttcagatcccacctcctttcatacatcgcaacactcgaaaagctgaggctt
gaggatataaggggattcgtaaagaacaccctctactcgaggcagatgagccaagagagc
gccaagaagctcctttcggactccctcaggttcctcaaggagaaggggttcatagaagag
gaaggcaagtactacaaagctacaagctatggaaagtacgtctccgacctctatatagat
cctctctcagccgagctcgtaaaggaagcgttctcaaaaaagaagagggctacggacttc
tcaataatgcacataattgccgcaactccggacatgcccaagctcagcctgaaaaagaag
gagtttgcaaagatcgacgcagcattcgtggaactcatcccagaaatactcttgggattg
gaagacagagatgtctcatatgaggatatcctctccgaggtaaaaactgcgcttttcctc
tacgactggatcaatgaggttcccgagcaggaaatatgcgaaaaatacgatctagggcct
ggggatgtctactcatttatagagtcggcggcgtggatagcttatgcgatttacaagcta
tccgacgtcctcgagcaggctaagcagtattctaaaaagctggaggctttaagctacaga
gtcaagtacggaataaaggaagagctctacgagctggtatcaattccggagataggaagg
gtgagagccaggaacctctacagctctggcttcaggagcatagaagatataagaaaggcg
agtgtaaatgaactcatgagggttaggggaataggagaaaggctcgcttacagaattaaa
gaatacgctctcaagcactccgattaa
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