Fulvia fulva: CLAFUR5_00567
Help
Entry
CLAFUR5_00567 CDS
T08195
Name
(RefSeq) Transcription elongation factor spt5
KO
K15172
transcription elongation factor SPT5
Organism
ffu
Fulvia fulva
Pathway
ffu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CLAFUR5_00567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffu03021
]
CLAFUR5_00567
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_00567
Transcription machinery [BR:
ffu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CLAFUR5_00567
RNA polymerase I system
CLAFUR5_00567
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
CLAFUR5_00567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW5_SPT5
KOWx_SPT5
Spt5_N
Spt5-NGN
KOW4_SPT5
KOW2_Spt5
CTD
KOW1_SPT5
KOW
TopoV_HHH
DUF6897
Motif
Other DBs
NCBI-GeneID:
71980445
NCBI-ProteinID:
XP_047756732
UniProt:
A0A9Q8L7J5
LinkDB
All DBs
Position
1:join(2699917..2702661,2702715..2702963,2703016..2703054)
Genome browser
AA seq
1010 aa
AA seq
DB search
MANILDHNFEDDEEDDFNPQPEVGSDDEGDAKPRVEVEGEDDDDDQAPAARSRAETDGDD
ELREEDGDGINGAAEDEDDGIDNGNDNGDAEEDEDNQDEEEEEEDEDDEEDQVSRKRRKT
SKRNQFIDVEAEVDEDDEEEPEEEDDLPGEEMHPDDLQELPPGADRDDRMHRELDRQREA
QEAMDVEETAARLKERYGRQARGAGAGAAIVPQRLLLPSVNDPRIWRLKCRPGKEREIVF
SIQHRIVERSKSREPVQIYSAFERSGPMSGSLYVEAMRQDDIISSLEGITHIFFGTKPQM
IPVEEMPDLLRTRKQKRLEPGMYVRPKRGLYAGDLAQVDAIEPNGTEVYLKLVPRLDYGL
TEDANAPVMESDGQGGMKRKRVQRAVGQRPSARLFSEVEARKRHTRYLSKSTQSLMHNAW
NYQGKEYVDGFLIEPFKIGTLETTNVNPTLEEVTKFAAGNDDGTENLDLAALAATLKTSA
GADYLPGDKVQIYKGEQKGLTGRAVEVYGEVVRIRIGEGQLRGQTVEAPIRDLRKLFREG
DHVKVIGGSKWQDEVGMVVRTKDDRITILKDSDQTEITVFAKDLREATDSGGVVGASKYD
LFDLVQLDASTVGCIIKVDRESLRVMDQFGSIRTVLPSSISNKIERRRDQGPAADRAGNE
IKVGDTVREYGGESKSGSVQHVHRSYVFAQSRESRDNAGVWVARCGNVEIAAAKGGRVGP
DLTKMNTALRGPNAGAVPMPPPQQKGRDRLIGKTIKIRAGTTKGMIGIVKDTTDDMAIIE
LHAKNKKVTIAKDKLVVVDAQTGQTINSDARSFGSGRGGGPPGRTPMMGGQTPGRGFGGP
PGASSARTPAYAMGGGRTPTWKQDSGARTPAYAGGGQTAYGGGGFGGATAYGGQTSYGGA
TSYGGGSVWGGAGGNQSTWNPNGGGGRTPAYVSGSKTPAYSGGMEAPTPGFNSAPTPGNY
GDQPTPGAYRGAGGQYQTPASYNTPGGFPETPVPYSAETPAAHDDGPRYD
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggccaacatcctcgaccacaactttgaagacgacgaggaggatgacttcaacccgcag
cccgaggtcggtagtgacgatgagggcgacgcaaaaccgcgagttgaggtcgaaggagag
gacgatgacgacgaccaagcgccagctgccagatcgcgagcggaaacagacggcgatgat
gagctaagggaggaagatggagacggcataaatggtgcagcggaagacgaagacgatggt
attgacaatggaaacgacaatggcgatgctgaagaagacgaggataaccaggacgaggaa
gaagaggaagaggatgaggatgatgaggaggaccaggtctcgcgcaagcgcagaaagaca
tcaaagcgcaatcagttcatcgatgtggaggctgaagtagatgaggacgacgaagaggag
ccggaagaagaggacgacctacctggcgaagagatgcacccagatgacctgcaagagctt
cctcccggggctgaccgtgacgaccgcatgcatcgcgagcttgatcggcaacgagaggca
caggaggctatggatgtggaagagacggcggctagactcaaggagagatacggtcgccag
gcgcgaggtgcaggtgctggagctgccattgttccacaacgactgctactgcccagtgtc
aatgacccacgcatctggcggctgaaatgccgacctggcaaggaacgtgagattgtcttc
tccatccagcaccggatcgtcgagcgctctaagagccgcgagcctgtgcagatctactct
gccttcgaacgaagtggacctatgagtggcagtctttatgtggaagctatgcgccaggac
gacatcatctcgtctcttgaaggcatcacgcacatcttcttcggcacgaagccgcagatg
atccctgtcgaagagatgcctgatctcctgaggaccagaaaacaaaagcgcctcgagccg
ggcatgtacgtgaggccaaagcgcggcctgtacgcaggagatcttgcacaggtcgatgca
attgagccgaatggtacggaagtctatctcaaactcgtgccccgtctcgattacggtctg
acagaagatgcaaatgcacctgtcatggagtcagatggtcagggtggcatgaagcgcaag
cgagttcagcgtgcagtcgggcaacgcccatcagctcgccttttcagcgaggtcgaggcc
aggaagaggcacaccagatacctcagcaagagtacccagagtctgatgcacaacgcctgg
aactaccagggtaaagagtacgtggacggtttcttgatcgagcccttcaagatcggtacc
ctggagacgaccaatgtcaacccgactctcgaggaagtcaccaagtttgccgctggaaac
gacgatggcactgagaacctcgacctcgcagctttggccgccacgctgaaaacgagcgct
ggtgccgactatctcccgggtgacaaagtccaaatctacaagggcgagcaaaaaggtctt
actggtcgtgctgtggaagtctacggtgaagtggtcaggatacgcatcggcgaaggacaa
cttcggggacagaccgtggaagcacccatccgagacctccgtaaactgtttcgagagggt
gaccatgtcaaggtgattggaggcagcaagtggcaggatgaagtgggcatggtggtcaga
accaaggacgatcgcataaccatactgaaagacagcgaccagacagagattactgtcttc
gccaaggacttgcgagaagcgacggacagcggtggcgtagtcggcgccagcaagtacgac
ctcttcgacctggtacagctagacgcttcaactgttggatgcatcatcaaggtcgaccgc
gagagtctacgggtcatggaccagtttggcagcatccggaccgtactcccgtcaagtatc
tcgaacaagattgagcgtcggagagatcaaggtcctgcagcagaccgtgctggtaatgag
atcaaggttggcgacacggtgcgtgagtatggcggagagagtaagtcgggttctgtgcag
cacgtccaccgaagctacgtcttcgcgcagagcagggagtcaagagacaatgctggtgtc
tgggttgcgcgatgcggcaatgtggaaatcgcggccgctaagggcggtcgtgttggacca
gatttgaccaagatgaacaccgctctacgcggccccaatgctggagccgtgcccatgcca
ccaccacaacaaaagggtagggataggctgattggtaagacaatcaagatccgtgccggc
accacgaagggcatgatcggcatagtcaaggacaccaccgacgacatggccatcatcgag
ctccacgcgaagaacaaaaaggtcacgatagccaaggacaagctcgtggtcgtcgacgca
caaaccggccagaccatcaactctgatgcgcgatcattcggctctggacgcggaggtggc
ccacctggccgcacacctatgatgggtggccagacaccaggcagaggattcggcggccca
cctggggccagctctgctcgcacaccagcgtacgctatgggtggtggtaggacaccgacc
tggaagcaggacagtggtgcacgcacgcctgcttacgctggtggcggccagactgcatat
ggtggcggaggcttcggcggtgctacagcatacggcggccagacaagctatggtggagcc
actagctatggcggtggaagtgtgtggggaggcgcaggtggcaatcaatcgacctggaac
cccaatggcggcggcggcagaacaccagcatacgtgtctggatccaagacaccggcatac
tcgggtggaatggaagcaccaacaccaggcttcaattctgctccaacccctggcaactat
ggtgatcagccgacccccggtgcgtacaggggtgcaggtggtcagtatcagacaccagct
tcatacaacacaccgggtggctttccagaaacaccggttccgtactcagcagagacaccc
gcagcacacgacgacggcccgagatacgattag
DBGET
integrated database retrieval system
