Fulvia fulva: CLAFUR5_00721
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Entry
CLAFUR5_00721 CDS
T08195
Name
(RefSeq) RNA polymerase II transcription factor B subunit 3
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
ffu
Fulvia fulva
Pathway
ffu03022
Basal transcription factors
ffu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLAFUR5_00721
09124 Replication and repair
03420 Nucleotide excision repair
CLAFUR5_00721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffu03021
]
CLAFUR5_00721
03400 DNA repair and recombination proteins [BR:
ffu03400
]
CLAFUR5_00721
Transcription machinery [BR:
ffu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CLAFUR5_00721
DNA repair and recombination proteins [BR:
ffu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CLAFUR5_00721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-C3HC4_2
zf-RING_16
zf-RING_2
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
71980599
NCBI-ProteinID:
XP_047755969
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All DBs
Position
1:3443435..3444514
Genome browser
AA seq
359 aa
AA seq
DB search
MRLASTNTPTDTPPPAEVCPVCKSTTYMKRNMRFLVNPACYHKMCESCVDRIFSHGPAQC
PIKGCSETLRKNRFRQQTFEDIKVEREVDIRKKVAAVFNRREDEFESLRAYNDYLNEVED
ITFNLINNIDLEDTERRFRAYEDQHKSEIAENASLAQQESMSYSALQKAEREQAKQRREA
TRREEAEEKREAAANKKDMLRRLESGQDPEQIAREGQGVALKKRMNRQAAAERQAALQAA
DTRNGSSSLVIKGLKAKTKAAPEAPLDPFGGLSFEHRYYAVQDEYVWDVLRDARKEAVIG
AGGYDVSSFTSRALCEAFSGLGVMIADEKTERDRITQHTAVDTFKAELAAKDVKMEEAP
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgccagcacgaacaccccaactgacactcctccgcctgcagaagtatgcccc
gtgtgcaagtccaccacctacatgaagcgcaacatgcgcttcctcgtcaacccggcatgc
taccacaagatgtgtgagtcctgcgtggaccgcatcttctcccatggccccgcacagtgt
cccatcaagggttgcagcgagacactgcgcaagaaccgcttccgacagcagaccttcgag
gacatcaaggtcgagagggaggtcgacatccggaagaaggtggccgcagtcttcaacagg
agagaggatgagtttgaaagcttacgagcctacaacgactacctgaacgaggtcgaggac
atcaccttcaacctgatcaacaacatcgatctggaggataccgagaggcgattcagagca
tacgaagatcaacacaagagcgagatcgccgagaacgccagtctggctcagcaggaaagt
atgtcatattcagccttgcaaaaggcggagcgggaacaagccaaacagaggcgagaagca
acacgcagggaagaggcggaggagaagcgggaagcagctgcgaacaagaaggacatgcta
cgacgactagagagcggacaagatcccgagcagatcgcgagagaagggcaaggcgtcgca
ctgaagaagcgcatgaaccgtcaagcagccgcagaacgacaagcagcactccaagccgcc
gacacaaggaatggtagcagcagtctggtcatcaagggcctcaaggcgaaaacgaaagcc
gcgccggaagcaccactcgatccctttggcggcttgagcttcgagcaccgatactatgcc
gtccaggacgagtacgtatgggacgttctgcgagacgcaagaaaggaggctgtaatcgga
gctggaggctacgacgtatcatctttcacgagtcgtgcgttgtgtgaagcgttcagcgga
cttggtgttatgatcgccgacgagaaaacagagcgggacagaatcacgcagcatacagcg
gtcgacactttcaaagctgaactcgctgccaaagacgtcaagatggaggaagcaccttga
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