Fulvia fulva: CLAFUR5_00771
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Entry
CLAFUR5_00771 CDS
T08195
Name
(RefSeq) ATP-dependent RNA helicase dbp5
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ffu
Fulvia fulva
Pathway
ffu03013
Nucleocytoplasmic transport
ffu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLAFUR5_00771
03015 mRNA surveillance pathway
CLAFUR5_00771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_00771
Enzymes [BR:
ffu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLAFUR5_00771
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CLAFUR5_00771
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
tRNA-synt_1b
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
71980649
NCBI-ProteinID:
XP_047757372
UniProt:
A0A9Q8P4N4
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All DBs
Position
1:complement(join(3699126..3700314,3700365..3701125))
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AA seq
649 aa
AA seq
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MRLRGAAVNVGSSKVWFGTLHAWRGFLIAARIPATPIAKRKDPSSFLYSKSSLAQFTRQK
PHTHATHNNLVILPRQMRSASHSFNASCTTITTSPATCSPSQSTTAASRHALSFSHVHNT
PPAMSDNKATSSEPEPANLTKLSISDDSSKPAATTNGSNPAASTFTPGKFNWADDAETPT
ADSDKKMDATKADKKSEGEYLAKAQTDGATTWLRGSAGLDEPEFNVNVKLADLQADPTNP
LYSAKSFEDANLGLKPEIQQALATMGFIQPSKIQERALPLLLKQTPTENLIGQSQSGTGK
TAAFVINMLQRIDLSSTKAQAIVLAPTRELARQIKGVVELMGVFLRPQGLRDVYEAVSGS
ARTNVEAQILVGTPGTVIDLLKRKHIDGRDIKILTLDEADNMLDMQGMGDQCKRVRQMIS
RQAQLVLFSATFPPAVLAFAEQFAAGANQITLQVEQLTVKGIHQMYLDCMNDEEKYRALV
SFYKLMTVASSIIFVKRRDTAAEIERRLNAEGHSVVSLTGALEGPARDAVFEKFRSGEAK
VLIATNVLARGIDVQTVTMVVNYDIPETVDGQPDFQTYLHRIGRTGRFGRTGAAISLVHD
KRSWQGLMAICKYFGVQPEKIDLSNMDEVEKHIKTIMKNQRAAVDVDMS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagactccggggcgcagcagtgaacgtcggatcttccaaggtttggtttggcacgctg
cacgcgtggcggggcttcctcatcgcggcccgaatccctgcaacgccaatcgcgaaacgg
aaggacccctcgtcatttctgtacagcaagagctctcttgctcaattcacccgccaaaaa
cctcacacacacgcgacacacaacaacttggtcatcttgccgcgtcaaatgagaagcgcg
tcacattctttcaacgccagctgtacgaccatcactacgtcaccagccacgtgttcgccc
tcacaaagcaccaccgccgcatcgagacacgcactttctttcagtcacgtccacaataca
ccgcccgccatgtcggacaataaggcaacatcctcagagcccgagccagcaaatctgaca
aaactctccatctccgatgactcgagcaagcctgccgccaccaccaacggaagcaatcca
gctgcctccaccttcacaccgggaaagttcaactgggcagacgacgccgagacacccact
gcagactcggacaagaagatggacgcaacaaaggcggacaagaagagcgagggcgaatat
ctcgcaaaggcgcagactgatggtgctaccacctggctgcgcggctcagctggactcgac
gagcccgagttcaatgtcaacgtgaagctcgcagatctccaagccgacccgacaaacccg
ctatactcggcaaagtctttcgaagacgccaatctcggactcaagccggaaatccagcaa
gctctagccaccatgggcttcatccaaccttccaagatccaagagcgcgctcttccgctt
ttactcaagcaaaccccgaccgagaacctgatcggacagtcacaatcaggaactggcaag
acagccgccttcgtcatcaacatgctgcagcgcatcgacttgagctccaccaaggcacaa
gctatcgtgctggctccgacacgtgagctggccaggcagatcaagggagtcgtcgagctc
atgggcgtgttcctcagacctcagggcttgcgcgacgtctacgaagcagtgtcaggctcc
gctcgaaccaacgtcgaagcccagatcctggtcggcacgccgggcaccgtcatcgacctg
ctcaagagaaagcatatcgacggacgcgacatcaagatcctcacacttgatgaagcggac
aacatgctggacatgcagggtatgggtgaccagtgcaagcgggtgaggcagatgatcagc
cgtcaggcccagctcgtcctcttctctgctacatttcctcctgctgtgctggcattcgca
gagcagtttgcagctggcgccaaccaaatcactctccaggtcgagcagctcactgtcaag
ggcatccaccagatgtaccttgactgtatgaacgacgaggagaaatacagagctctggtc
agcttctacaagctcatgacggtggcttcctcgatcatcttcgtgaagcgtcgcgacact
gccgcagagattgagcgtcgtctcaatgccgaaggccacagcgtcgtttctctcactggc
gcactggagggccccgcaagagatgccgtgttcgaaaagttccgcagtggtgaagccaag
gtactcatcgccaccaatgtcctcgctcgcggtatcgacgtccagaccgttaccatggtc
gtcaattacgacattccagagactgtcgacggccagcctgacttccagacctacctccac
cgcattggtcgcactggtcgtttcggccgcaccggtgctgccatcagtctcgtacacgat
aagcgcagctggcagggactcatggccatctgcaagtactttggggtccagccagagaag
atcgatctatccaacatggacgaagtcgaaaagcacatcaagaccatcatgaagaaccaa
cgtgcagcggtcgacgttgatatgagctga
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