KEGG   Fulvia fulva: CLAFUR5_01004
Entry
CLAFUR5_01004     CDS       T08195                                 
Name
(RefSeq) uncharacterized protein
  KO
K12880  THO complex subunit 3
Organism
ffu  Fulvia fulva
Pathway
ffu03013  Nucleocytoplasmic transport
ffu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ffu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CLAFUR5_01004
  09122 Translation
   03013 Nucleocytoplasmic transport
    CLAFUR5_01004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ffu03019]
    CLAFUR5_01004
   03041 Spliceosome [BR:ffu03041]
    CLAFUR5_01004
Messenger RNA biogenesis [BR:ffu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     CLAFUR5_01004
Spliceosome [BR:ffu03041]
 Complex C
  Other components
   EJC/TREX
    CLAFUR5_01004
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CLAFUR5_01004
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 WD40_CDC20-Fz Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 ANAPC4_WD40 WDR55 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_EIPR1 eIF2A Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st B-prop_COPA_B_2nd Tricorn_2nd WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st PROPPIN Beta-prop_Vps41 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 71980882
NCBI-ProteinID: XP_047755815
UniProt: A0A9Q8L608
LinkDB
Position
1:complement(5155893..5157047)
AA seq 384 aa
MAPPARSRPIKKNELKDLFVSKANPPVLFSESLRPSTLAPNVRSISWSPTGSMVAASVSS
NIRVWNAERPDVKNSTELRDTSSKPGSHASNVEKIVFSPKHEGLLASTGVDGMLKLWDVR
LPGGAASLGTGVAAHAKGGLTTKAGEHKVDNQGLFLTWHPNATELLVGRKDDVITSVDVR
RTDNVLFGASTAGSTATNSYELTATDRTPTKDGKVSYNQMAFSNDASTLFSAETNGGIRI
YDYPSMKKLHLLSGHTASVNAVTYSPAGTYLATGGSDGIINLFNTSTWLCDHALMDHTNA
VRDLSFSFDGNYLVVGSGTADSKDGDKGINIYHVDTGDVVHKVETTNVVTYVAWHPHRYA
VAYGGDPGGLKIVGGLSDSVIPAR
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggcacctccagcacggtcgaggccgatcaaaaagaacgagctgaaagacctgttcgtg
tccaaggcaaacccaccggtcctcttctccgaatcgctccggcctagtactctggcaccc
aatgttcggagcatatcatggtcgcccaccggttcgatggtcgccgcctcggtctcatcc
aacatacgagtgtggaacgccgagcgacccgacgtgaagaacagcacggagctgcgagac
acgtcttcaaagccaggcagccacgctagcaacgtggagaagattgtcttctcgcccaag
catgaaggcctgctggcaagcactggcgtagacggaatgctcaagctgtgggacgttcgg
cttccaggcggtgccgcgtctttgggaactggcgttgcggcgcatgcaaaaggtggattg
actacgaaagcgggcgagcacaaagtggacaaccaggggctgtttctgacgtggcatccc
aatgccaccgagctccttgttggtcgcaaggacgatgtcatcacgtctgtggacgttcgt
cggacagacaatgtactatttggtgcctccaccgccggatccactgcgacaaatagctac
gagctgactgccacggatcggaccccaacgaaagatgggaaagtcagctacaaccagatg
gcattttcaaacgatgcaagtaccctcttctccgccgagaccaatggaggcatccgcata
tacgactatccctccatgaagaagctccacttactgtccggccacactgcatcagtcaat
gctgtcacctactccccagccggcacatatctcgccacaggagggtctgatggtatcatt
aacctcttcaacacaagtacctggctgtgcgaccatgctctcatggaccacacgaacgcc
gtacgagacctgagcttcagcttcgatggcaattacctcgttgtgggtagcgggacggct
gacagcaaggacggcgataaaggcatcaatatctaccacgttgataccggcgacgtcgtg
cacaaagtcgagacgaccaacgtggtcacatatgttgcttggcacccccatcgctatgcg
gttgcttacggaggagatcccggtggtctcaagatagttggagggttgagtgattcagtc
attccagcaaggtag

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