Fulvia fulva: CLAFUR5_02015
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Entry
CLAFUR5_02015 CDS
T08195
Name
(RefSeq) DNA mismatch repair protein msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ffu
Fulvia fulva
Pathway
ffu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CLAFUR5_02015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffu03400
]
CLAFUR5_02015
DNA repair and recombination proteins [BR:
ffu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CLAFUR5_02015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_21
AAA_29
nSTAND_NTPase5
AAA_23
Motif
Other DBs
NCBI-GeneID:
71981893
NCBI-ProteinID:
XP_047755750
UniProt:
A0A9Q8P335
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Position
1:join(10122631..10122922,10122975..10123190,10123310..10126407)
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AA seq
1201 aa
AA seq
DB search
MARAKDASIKSTPSTQKAAPSSTAKSSSKQQSIAGFFTKRPTPAASSSKPTKRVADDGDG
KVPRSSADASSNIASSPQTVLGASQRSSIIDGRNKENETPGTAYSSPSRKAKKPVSYAES
DEDEDEGLKPSSGNRRASKRRRISVKDDDSDDEFGLDAGTQAAMLESDQDMDDFVVDDDL
EDDVKPSKSKKRSNASTSGKASSRSSIRPSSPPAPLPKEETEEIPVSGTTTLQWHFDPDA
PPSSEPRRSAPPKRSTTSSNGPPKKQKAHTTEPSERYPWLASVQDADRNPPDHPDYDKRT
IFVPPMAWNNFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRV
NMRMVGVPEASLDHWANMFVAKGYKIARVDQMESALGKDMRERNIKGKKEEKVIRRELAS
VLTSGTLVEGSMLQDDMATYCAAIKESELDGKPHFGIAFVDTATAQFQLTEIIDDADMTK
FETFVAQTRPGEILLEKGCVSAKALRMLKNNTPPTTIWNYLKPDKEFLSADKTRMKIDGE
AYFDKSVEDNLSAWPAVLQEAKEKEIVFSALGGLIWYLSTLKIERDLVTLGNFAWYDPIR
KASSLVLDGQSLINLEIFANTFDGSTQGTLFTMLNRCVTPFGKRMLRQWVCHPSADARKI
NQRFDAVEALNADGTVMDRFCASLSRLPDLERLISRVHAGQCRPQDFVKVLEGFEQIEYT
MSLLGSFGSGEGLLGQLISSMPDLAGALNTWKDAFDRTQAKEDGLFIPQPGVEEDFDESQ
QRIDGIEKDLQKLLQKARKDLGSSTIKFTDNGKEIYQLEVPLKVGGKVPKHWKQMSATKQ
VKRWYFPELEGLVQDLKEAQEMHGQVIKALAGRFFARFDADYQIWLAAAKIIAQLDCLIS
LAKASASMGSPSCRPEFLEDDNARSVLEFQTLRHPCIETTTNFIPNDIGLGGDAASITLL
TGANAAGKSTVLRMTCVAVILAQIGCYVPCESARMTPVDRIMSRLGAHDNIFAGQSTFMV
ELSETKKILAEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHVGALGYFATHYHSL
AAEFQHHPEIVAKRMAVQVDDDRRDVTFLYQLENGVAEGSYGMHCAAMCGIPNKVIDRAE
EAAQNWEHTGRIHESLQKAQESSWLPLGLLSDISWVLKDGEEEEGVAENGLEVLRKAIAA
L
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgccaaggatgccagcatcaagtcaacaccatcaacacaaaaggcagcacct
tccagcacggccaaatcaagctccaaacagcagagcattgccggcttcttcacaaagcgc
ccaacgcctgctgcatcaagcagcaagcctaccaagcgtgtagctgatgatggcgacggg
aaagtgccgcgtagcagcgccgatgcctccagcaacatagcttccagtccgcagacagtc
ttaggggcgtcccagcggagctccatcatcgatggacgcaacaaggagaacgaaacgcca
ggcacggcatattctagcccttctcgaaaggccaagaagccagtcagctatgccgaatcc
gatgaagacgaagatgaaggtcttaagccatcatctggcaacagacgtgcttcgaagaga
cgtagaatcagtgtcaaagatgatgactcggacgatgagtttggtctcgatgcaggtact
caagccgcaatgctggaaagtgaccaagacatggacgacttcgtggtagacgacgatctg
gaggacgatgtgaagccatccaagtccaagaagcgatctaatgcatcaacttcaggcaaa
gcatcgagcagaagctccataaggccttcttctcccccagcaccactaccaaaggaggag
accgaggagataccagtctccggaacgacgacactacagtggcatttcgatccggatgct
ccgccgtcgtcagagccacgacgaagcgctcctcccaagcggtcaaccaccagttccaat
ggaccacccaagaagcagaaagctcatacgacagagccatctgagcgatatccttggcta
gcttcggtgcaggatgcggataggaacccacctgatcatccggactacgacaagcgtacc
atttttgttcctccaatggcctggaataacttttcaccattcgagaagcagtactgggag
atcaagcagaaattttgggacacgattgtgttcttcaagaagggcaagttctacgagctg
tatgagaacgatgcgaccatcggccatcaactgttcgatcttaaattgactgatagagtc
aatatgcggatggtcggtgttcccgaagccagtcttgaccattgggccaacatgtttgtt
gcgaaaggctacaagatcgcgcgtgttgaccagatggagtcggccctcggcaaggacatg
cgtgagcgaaacatcaagggcaagaaggaagagaaagtcatccgaagagagcttgcgtcg
gtactgaccagtgggactttggtggaaggcagcatgcttcaagacgatatggccacgtac
tgtgctgcgatcaaggaatcggagctggatggcaagccgcacttcggcattgcgttcgtt
gacacggccaccgcacaatttcaactgacggagattatcgacgatgctgacatgaccaag
tttgagacgtttgtcgcccaaaccagacctggcgagattctgcttgagaaaggctgtgtg
tctgccaaggcacttcgcatgttgaagaacaacactccgccgacgacaatctggaattat
cttaaaccggacaaggagttcttgtccgccgacaagacccgcatgaagatcgacggcgaa
gcctacttcgacaagtcagttgaagacaacctcagtgcatggcccgcggtactgcaagag
gccaaggagaaggagatagtattctctgccctgggcggccttatctggtatttgagcact
ctgaagatcgagcgtgacctggtcactttgggcaactttgcctggtacgatcccattcga
aaagcatcaagcttggttctggacggccaaagcctgatcaacctggagatcttcgcaaac
acgttcgatggaagcactcagggcacactcttcacgatgctcaaccgttgcgtgacacct
ttcggcaaacgcatgctgagacagtgggtgtgccatccatcggcagacgccaggaagatc
aaccagcgtttcgatgccgttgaagctctgaatgcagatggcactgtcatggatcgattc
tgcgcgtcgctttcccgactgcctgacctcgagcgattgatctcacgcgtacacgctggt
caatgtaggccacaggatttcgtcaaagtcctcgagggtttcgagcagatcgagtacacc
atgtcactcctgggctcattcggttctggcgaaggactactaggccagctcatctcatct
atgcccgatctcgctggtgctttgaacacctggaaggatgcttttgacagaacccaggca
aaagaggacggtctgttcattccacaacccggcgtcgaggaggactttgacgagagccag
caacgtattgacggcatcgagaaagaccttcagaagcttctacaaaaggcacggaaggac
cttggctctagcacgatcaaattcaccgacaacggcaaggagatctaccagctggaggta
ccgctgaaagtcggaggcaaggtaccgaagcactggaagcaaatgtctgcaaccaaacaa
gtcaagcgctggtacttcccagagctcgagggactcgtgcaagacctcaaagaagcgcaa
gagatgcacggccaggtaatcaaagctctggccggtcgcttcttcgcgcgattcgacgct
gattaccagatctggctggcggcagctaagattatcgctcagctcgactgtctgatctct
ctcgccaaagcatctgcgtcaatggggtcgccttcgtgcagacctgagtttttggaggat
gacaatgcacgcagcgttctggagttccagactctgcgccacccttgtattgagaccaca
accaacttcatcccgaacgacatcggcctaggcggcgacgcagcctccattacgttgctc
acgggagccaatgcggccggaaaatcaacagtcctacgcatgacctgtgtcgcagtcatc
ctcgcgcagatcggctgctacgtcccttgcgaatctgcacgcatgacgcccgtcgaccgc
atcatgtcccgtctcggcgcgcacgacaacatcttcgccggccaaagcactttcatggtc
gaactcagcgagacgaagaagatcctggccgaagcaacgccacgctccctggtcatcctc
gacgaactgggtcgtggcaccagcagctacgacggtgtcgcggtcgctcaagcagtcctt
catcatgtcgctacccacgtcggcgccttgggttacttcgcaacccattaccactccctc
gccgcggaattccaacatcaccccgagatcgtcgcgaagcgcatggcagtgcaagtcgat
gacgaccgccgcgatgtcacgttcctgtatcaactagagaatggtgttgcggaaggtagt
tatggcatgcattgcgctgcgatgtgtggcatcccgaacaaggtcatcgaccgcgctgag
gaagctgcgcagaactgggagcatacgggcaggattcacgagagtctgcagaaggcgcag
gagagtagttggttgccattaggattgctgagtgatattagctgggtgctgaaggatgga
gaggaagaggagggtgttgcggagaatgggctggaggtgttgaggaaggctattgctgca
ttgtga
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integrated database retrieval system
