KEGG   Fulvia fulva: CLAFUR5_03434
Entry
CLAFUR5_03434     CDS       T08195                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
ffu  Fulvia fulva
Pathway
ffu03018  RNA degradation
ffu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ffu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CLAFUR5_03434
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CLAFUR5_03434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ffu03019]
    CLAFUR5_03434
   03041 Spliceosome [BR:ffu03041]
    CLAFUR5_03434
Messenger RNA biogenesis [BR:ffu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CLAFUR5_03434
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CLAFUR5_03434
Spliceosome [BR:ffu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CLAFUR5_03434
SSDB
Motif
Pfam: LSM FoP_duplication DUF150_C DUF6897
Other DBs
NCBI-GeneID: 71983312
NCBI-ProteinID: XP_047758623
UniProt: A0A9Q8LB96
LinkDB
Position
2:join(5510493..5510685,5510739..5510810,5510861..5510997)
AA seq 133 aa
MSEHASFRGGGDRGRGGRGRGGGDRGGRGGGNQQQGAERKKENILDLAKYMDKEISVKFN
GGREVTGTLKGYDQLMNLVLDNVKEVTRDEEGNTSTRNLGLLVARGTLLVLISPLDGSEE
IANPFIQQDDDDE
NT seq 402 nt   +upstreamnt  +downstreamnt
atgtcggagcatgcaagcttcagaggcggcggtgacagaggtcgcggtggacgtggtcgt
ggaggcggcgatcgtggcggacgtggcggaggcaatcagcagcagggcgccgagcgaaag
aaagaaaacattctcgacctcgccaagtacatggacaaagagatcagtgtgaagttcaac
ggtggccgcgaagtgaccggtaccttgaagggctatgatcagctcatgaacctcgtgttg
gacaacgtcaaggaagtgacgagagatgaggaaggaaataccagcacccgaaatctaggt
cttctagtggcgagaggcacactcctggtcttgatatcaccactggatggcagcgaggaa
atcgccaatcccttcatacagcaggatgacgatgacgagtaa

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