Fulvia fulva: CLAFUR5_03574
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Entry
CLAFUR5_03574 CDS
T08195
Name
(RefSeq) Regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
ffu
Fulvia fulva
Pathway
ffu03013
Nucleocytoplasmic transport
ffu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLAFUR5_03574
03015 mRNA surveillance pathway
CLAFUR5_03574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_03574
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CLAFUR5_03574
mRNA cycle factors
P-body specific factors
CLAFUR5_03574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
ApeC
Motif
Other DBs
NCBI-GeneID:
71983452
NCBI-ProteinID:
XP_047758621
UniProt:
A0A9Q8LB51
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Position
2:complement(join(5897646..5898227,5898281..5901405,5901463..5901529))
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AA seq
1257 aa
AA seq
DB search
MMKRRRRRDLKEANEKVWNGEQDVFPVQGSLDSNLKKNTAFIKRLRTALTAANVGIFLQE
IRSLSLHKYLAEIISACYEGITKLKVVGDIAAGVEVLSALHQRFGPEEFTCYLGWYVGRG
LATPDKAQLKALATDVREREEKERIARQRVLLRVATELWLVGVLKSLEDVVQPAEAGRAK
AAEGTVKPKTNGTRSDTADPEPFPLEVLKDMLGQDREHVNLPLVVLFVKTFAWDILGSKS
AKTEGRQAVAEDGATRTTNGHAGSATTTENDDGASPDPPLTPPALQQRFQNILLRYFEDV
KSHIVRDQDRLTTQGKRNAEAYVKSGEVFEDRQTNYEKSIKAQEKLVSSAQTLAEVLGAD
MPDLSEKDSNSSGFEGSIGLVKTGEYLRGQAEGAGIWEDEDERRFYESLVDLKDRVPGIL
LEDGKKKKNENDEQVGKKVDEVADAKEKPTELEDSSTAIANKPVGAQVDALLARLHELIT
KEQVDQFAIDFCFLNSKASRNRLIKSIEEIPKGRTDLLPLYARLVATLGRYLQDIPQAMI
SYLDDEFRSLQRRKSKDFLGQVRMVNIRYIAELTKFGVVPEHVIFHCLKVSLDDFSRMNI
EVIANLLENCGRYLLRNPDTSPRMTSFLETLQRKKAAQHLGQQERMLIENAAYYVNPSER
AAIQQKERTTLDLYVRKLVYVDLSKKTLDKVIKQIRKLHWEETEVVDILRKIFVKPGKIR
FGNIYLLAMMLAALYRFHPSFTITVLDELLERITVGLEINDFKYNQRRIAEVKYLGELYM
YRIVDSQLVFDTLYKLLNYGHAGGYARPGNTCAMDLPDDFFRVRLVCAVLETCGHCFEKG
AAKKKLDFFLNFFQFYINVKDQLPMDIEFVIQDTYNLLRPQWKLVLGNLPEAGKVFAEAT
KQHYRDTAAGKTQEPEEQEEPEAEGALSDDARHDGEEDDDAADVEGGNPKSDSDDVAQGD
DEKQADDSDEEEHIVVTRPDEYRDPEADADFDRELAKMMAESVESRKFDRKPMFDVPLPM
RRTARDPAIATEENVEEVKQPQPQVNGAATMKFALLSKKGNRQQTRSIDLPSDSSFAVAM
RSQQQAEKAEQQRIKNLVLNYDLNDDQADGESRPAFHYVQSNKHSVRLVGTGSLNKSLNI
HGRSQHSTKSDEENVTPHESDNDDPESFTDETGSYDSLHGVPRYDKSGNTRSKQRARKLQ
LGDIDWYGTHRSSTASTPAELPEGHHSLDQYVVDKKSATRGRRGSVSRRSSAQASKG
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcgccgacgccgtagggacctcaaagaggcgaatgaaaaggtgtggaatgga
gagcaagacgtcttccctgtgcagggctcgctggattccaacctaaaaaagaacactgcc
ttcatcaaacgcctgcgcacggcgctcaccgcagccaacgtcggcatcttcctacaagag
atccgatcgctatctctgcacaaatacctggccgagatcatttccgcctgctacgaggga
atcaccaagcttaaggttgttggcgacatcgctgctggagtcgaagtgctaagtgcgcta
caccaacgattcggtccagaagagttcacgtgctatctagggtggtatgtcggacgagga
ctggctacgccggacaaagcacagctcaaggccttggccaccgatgtacgggagcgggag
gaaaaagagcgcattgcgcgacagcgggtactgctacgtgttgcgacggagttgtggctc
gtcggtgtgttgaagagcctggaagatgtggtgcagcctgcggaggcagggagagccaag
gctgcagaaggcacagtcaagcctaagacaaatgggacgaggtcagacactgcggatccg
gagccgttcccgctggaagtgctaaaggacatgcttggccaggaccgcgaacacgtcaac
ttgccactggtggtgctcttcgttaagaccttcgcttgggatattcttggatcaaagtcc
gcgaagaccgaaggacgacaggctgttgccgaagatggcgcgactcgcacgacaaatggc
catgctggatcggccactacgactgagaatgacgatggtgcttcacctgatcctccactg
accccgccggcactgcagcaacgatttcagaacatccttctacggtactttgaggatgta
aagtcgcatattgtacgggatcaggaccgcctcacgacgcaaggtaagcgcaatgctgag
gcctatgtgaagtctggcgaagtgtttgaagatcgtcagaccaattacgaaaagtcgatc
aaagcccaggagaagcttgtgtcgagtgcgcagactctggctgaggtgctcggtgctgat
atgccagatctctcggagaaggacagcaattcgagcggcttcgaaggcagcataggcttg
gtcaagactggcgagtatctaagaggccaggctgagggtgcgggcatctgggaagacgaa
gacgagcgtcggttctacgagagtctagtcgacctcaaagaccgtgtccctggcattctg
cttgaggatggcaagaagaagaagaacgagaacgatgagcaagtcgggaagaaggtcgac
gaggttgcagatgccaaggagaagcccaccgagctcgaagatagttctactgctattgcg
aacaagcccgttggagctcaagtcgatgcgcttctcgctcggttgcacgaactcataaca
aaagagcaagtcgatcaattcgctatcgacttttgcttcctcaattcaaaggcctctcgc
aacagactcatcaagtcaatcgaggagatcccgaagggcaggaccgatctattacctctg
tatgcgcgcttggttgctaccctcggacgatatctacaggacatcccacaggccatgatt
tcttatctcgacgatgagtttcgaagcctgcagcgacgcaagtcgaaagacttccttggt
caagtccgcatggtgaacattcgctacattgcagagctcaccaaatttggcgtggttccg
gagcacgtcatctttcactgtctcaaggtcagcctagacgacttcagcaggatgaacatt
gaagttatagcaaatcttctagagaactgtggtcgctacctgctgcgcaacccggacacc
tcgccacggatgacttccttcttggagacattgcagcgcaagaaggcggctcagcatctc
ggtcagcaagagcgcatgctgatagaaaatgccgcttactacgtgaatccttccgagcgt
gctgctatacagcagaaagagcggacgaccctggacctgtatgtgagaaagctcgtctac
gtcgatcttagcaagaagacgctcgacaaggtcatcaagcagattcgaaaactgcattgg
gaagagacggaagtggtcgatatcctgcgcaagatcttcgttaaaccaggcaagatcagg
ttcggcaacatctacctcctggctatgatgcttgccgccctttatcgcttccatccgagc
ttcacgattactgtattggacgagcttctggagcgaattaccgtcggtctggagatcaat
gacttcaagtacaaccagcgcaggatcgccgaagtcaaatatttgggagagctgtacatg
tatcgtatcgtggactcacagcttgtcttcgatacgctctacaaacttctcaactacggt
catgcaggtggttatgctcgaccaggcaacacctgtgcaatggacctgccggacgatttc
tttcgtgtacgtctggtatgcgctgtcctggaaacctgcgggcattgcttcgagaagggc
gccgcgaagaagaagctggacttcttcttgaacttctttcagttctacatcaacgtcaag
gaccagcttccgatggacattgagtttgtgatccaagatacttacaatctccttcggcca
cagtggaagctcgtactgggcaatcttcccgaagctgggaaggtgtttgccgaggctacg
aagcagcactaccgcgacaccgctgcaggcaagacacaggaaccggaggagcaggaggag
cccgaagcagaaggtgcgctgtctgatgatgcccgccatgacggcgaggaggacgatgac
gccgcggatgtagagggtggaaacccaaagtctgacagcgatgatgtcgcacaaggtgat
gatgaaaagcaagctgatgattctgacgaagaggagcacatcgttgtcactcgtccagat
gagtacagagatccagaagcagatgccgacttcgatcgtgaacttgccaagatgatggcc
gaaagcgtcgagtcgcgcaagtttgaccgcaagccgatgttcgacgttcctctaccgatg
cggcgcacagctcgtgatcctgccattgctacagaagagaatgtcgaggaagtcaaacag
ccacaacctcaagtcaacggtgctgcgaccatgaagtttgcacttctgagcaagaagggc
aatcgccagcagactcgctcgatcgacctgccatcggattcttctttcgctgtcgctatg
cgatctcagcagcaagccgagaaagccgagcaacagaggatcaagaatctggtcttgaac
tatgatctcaacgacgatcaggcagacggtgaatcacgccccgcctttcattatgtgcag
tccaacaaacattcggttcgactcgtcggtacaggctcactcaacaagagcctgaacatt
catggtcgatctcaacattcgaccaagagcgacgaggagaatgtcaccccacacgaatct
gacaacgacgatcccgaatcattcactgacgagacaggttcttacgactctttgcatggc
gtcccacgatacgacaagtcaggcaacacgcgcagcaagcagcgcgcgaggaagttgcag
ttgggcgacatcgattggtatggcacacaccgttccagtactgcttctacccctgccgaa
ctcccggagggacatcactcactcgaccagtatgtcgtcgacaagaagtcggcgacgcgt
ggtcgtcgtggttctgtctctcggcgcagcagtgcccaggcatccaaaggctga
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