Fulvia fulva: CLAFUR5_04023
Help
Entry
CLAFUR5_04023 CDS
T08195
Name
(RefSeq) putative pectate lyase A
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ffu
Fulvia fulva
Pathway
ffu00040
Pentose and glucuronate interconversions
ffu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CLAFUR5_04023
Enzymes [BR:
ffu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CLAFUR5_04023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
71983901
NCBI-ProteinID:
XP_047760248
LinkDB
All DBs
Position
4:complement(join(672918..673060,673124..673607,673669..674160))
Genome browser
AA seq
372 aa
AA seq
DB search
MRSSVLVAALSFSTAVFAAPTWHDWIDSWKPSHASGLEGYALDNPLGPTTGGKGGKAITV
KTVEELVAAVAGDSPKIIYLDGEFRPSSRLVVGSNTSLLGKGKGANIIGEGINIYNAANV
IVRNISVRFVEGGDGMTVQNSTRVWVDHCEFESEISLELGPDFYDGQLDIVRASDWMTVS
YNYFHGKSSFSALQSLPLTSFRSLTNLPTLTDHWKSSLVGNSDVLREVDEGHLHITYHHN
FWQNIGTRGPAGRFGHQHIYNNLYEDFLYQAIHSRSDNQVLVEANKFMGDTRTALTTYGL
VVPEDSPNTCVCGDEELDGFANLGAKNDFGDAIVNITQVGDFTKAGYKYKLTPLKLLESV
VRKNVGLGKVKV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagatccagtgtccttgtagcagccttgagcttcagcactgcagtcttcgcagcacca
acctggcacgactggatcgactcctggaaaccaagccatgcttctggtcttgaaggatat
gcactcgacaacccactaggccccaccacagggggcaaaggcggcaaagccatcaccgtc
aagaccgtcgaagagctcgtagctgccgtagctggggacagccccaagatcatctacctc
gatggcgaattccgtccttcatcgcgtctggtagtcggctcaaacaccagcctcctcggc
aaggggaagggagccaacatcatcggcgaaggtatcaacatctacaatgcagcgaatgtc
attgttcgaaacatttccgttcgctttgttgagggtggagatggcatgacggtgcagaat
tcgacgagggtttgggttgatcattgcgagtttgagagtgagattagtcttgagcttggt
cctgatttctacgacggtcaactcgacatagtccgcgcctcagactggatgacagtctcc
tacaactacttccacggcaagtcctccttctccgccctccaatcccttcccctcacctcc
ttccgttccctcactaacctcccgaccctcacagaccactggaaatcctccctagtcggc
aactccgacgtcctccgcgaagtcgacgaaggccacctgcacataacctaccaccacaac
ttctggcagaacatcggtacgcgcggcccagcaggccgcttcggccatcaacacatctac
aacaacctctacgaagacttcctctaccaagccatccactcgagatcggataatcaagtg
ttggtagaggcgaacaagttcatgggtgataccaggacggcactgacgacgtatggattg
gtggtgccggaggatagcccgaatacttgtgtttgtggtgatgaggagttggatgggttt
gcgaatctgggggctaagaatgattttggtgatgctatcgttaacattacgcaagttggc
gacttcacgaaggctgggtataagtacaagttgacgccgctgaagttgctcgagtcagtg
gtacgcaagaacgttggattgggcaaggtgaaagtgtaa
DBGET
integrated database retrieval system
