Fulvia fulva: CLAFUR5_04673
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Entry
CLAFUR5_04673 CDS
T08195
Name
(RefSeq) General negative regulator of transcription subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ffu
Fulvia fulva
Pathway
ffu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLAFUR5_04673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_04673
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CLAFUR5_04673
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CLAFUR5_04673
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
ABC_tran_CTD
CorA
WKF
DUF1192
DUF7310
Motif
Other DBs
NCBI-GeneID:
71984551
NCBI-ProteinID:
XP_047761446
UniProt:
A0A9Q8LGQ7
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Position
4:complement(join(3217803..3217863,3217919..3219534,3219595..3219813,3219867..3219902))
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AA seq
643 aa
AA seq
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MAARKQQQEIDKEYKKVDEGVIEFNKIYDKLEASSNASQKEKLEDTLKKEIKKLQRSRDK
IKGWASQNDIKDKKPLMEKRKLIETQMEKFKAVEKEMKTKAFSKEGLNAAAKLDPKEKEK
MDVCDFLGNMVDELERQIESLEAEAEALQATLKKGKKDSGKADRVSELERTVERHKWHVG
KLELLLRTLENGSVETDQVKDIEDGIRYYVEQNQEVDFMEDDSIYDDFNLEEEEGLFGIA
GENDRVSSQDAQSTQDEPPDTEPVRPSIPTTKKSQTATEAPPRRPSVQLKSPLPALSSLH
TSSNSVNGKATESMKPAPLPTIPTGQPLKYASAAAAAAASDKNGVGMAPLPPPPGAIKPS
ETPSPAPVAAQPAPSAAVPDAPSPAEKAVEQPPKLPMPALKEEPKAPAPAPAPAPVSAPK
ASLRKQSPQTASAQPSRQQSNSVQKVLQPPSPDSGIAGIALSHGESAQEDDEEESVYHLP
SSLMDLLDSFEETKQRAKSDQPFDVALLNASRLTCPTAQDAEKPNHYKPQNPYNYTPSHY
PQEPLGIFDDPRLYSRIDTDSLFYSFYYRQGTYQQYLAAKALKSQSWRFHKQYQTWFQRH
EEPKNITEEFEQGTYRFFDYESTWMNRRKADFKFAYKFLEDDL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacggaaacagcagcaggaaatagacaaggagtacaagaaggtggacgagggc
gtgatcgagttcaacaagatctacgacaagcttgaggctagtagcaatgcgtcgcagaag
gagaagctcgaagacaccctcaagaaagagatcaagaagctgcagcgctcccgcgacaag
ataaaaggctgggccagtcaaaatgacatcaaggacaagaagccgctgatggagaagcgg
aagctcatcgagacgcaaatggagaagttcaaggccgtggagaaggagatgaagaccaag
gccttctccaaggaaggtctcaatgctgccgcgaaactcgatcccaaagagaaggagaag
atggatgtttgcgacttcctggggaatatggtggacgagctcgaacgacaaatcgaaagc
ttggaggccgaggcggaagcgttgcaagccacgctcaagaaaggcaagaaggactctggg
aaagcggatcgagtgagcgaactagagcggacggtcgagcgacataagtggcatgtaggg
aagctggaactgttactgcgaacgctcgagaacgggagcgtggaaacagatcaggtgaaa
gacattgaagatggcatcaggtattatgttgagcagaaccaagaagtggacttcatggaa
gatgacagcatatatgacgacttcaatctggaggaagaagaaggcctcttcggaattgcg
ggcgagaacgaccgggtgtcaagtcaggatgcacaaagcacacaggacgaaccaccggac
acagaacctgtacgaccaagcataccaaccaccaagaagtcacaaacagcaacagaggct
ccgccgagacggcctagcgtgcagctcaaatcgcctttacctgcgctttcgtcactacat
acaagctcaaatagcgtcaatggaaaggcaacagaatccatgaagccggcacctctaccg
acgataccgactgggcaacctctgaagtatgcctctgctgcagctgcggccgctgcgagc
gacaagaacggcgttgggatggcacctttacctccgcccccaggggctattaaaccaagc
gaaactccgtcacccgcaccagtcgcagcacaacctgccccgagcgcagcagtgccagac
gcaccttcacctgcagaaaaggctgtggaacagcctccgaaactgcccatgcctgccctc
aaggaagagcccaaagcaccagcaccagcaccagcaccagcacctgtgtcagcacccaag
gcatccttgcggaaacaatcaccgcaaactgcatcagcacaaccctcacgccagcaatca
aatagcgtgcagaaagtgttacagccgccaagtccggactccggaattgcgggcatcgct
ctatcgcacggcgagagtgctcaggaagatgacgaagaggagagcgtgtatcacctaccc
tcgtccctcatggaccttcttgattctttcgaagagacgaagcaacgagcgaagtcagat
cagccctttgacgtggcactgctcaatgcctcgcgcctgacgtgcccgacagcacaagat
gcagagaagccaaaccactacaagcctcagaatccctacaactacactccatctcactac
ccacaggagccgctaggaatattcgatgatcccaggctatacagccgcatcgacaccgac
agtctgttctattcgttctattacagacaaggcacttaccaacaataccttgcggcgaaa
gcgttgaagagccaaagttggcgcttccataagcaataccagacctggttccagcgacac
gaggagcctaagaatatcaccgaggagtttgagcaaggcacatatcgcttcttcgattac
gagtccacgtggatgaacaggagaaaggcagacttcaagtttgcctacaagttcctcgag
gatgatctatga
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