KEGG   Fulvia fulva: CLAFUR5_04820
Entry
CLAFUR5_04820     CDS       T08195                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
ffu  Fulvia fulva
Pathway
ffu03018  RNA degradation
ffu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ffu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CLAFUR5_04820
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CLAFUR5_04820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ffu03019]
    CLAFUR5_04820
   03041 Spliceosome [BR:ffu03041]
    CLAFUR5_04820
Messenger RNA biogenesis [BR:ffu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CLAFUR5_04820
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CLAFUR5_04820
Spliceosome [BR:ffu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CLAFUR5_04820
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 71984698
NCBI-ProteinID: XP_047761293
LinkDB
Position
4:complement(join(3927581..3927610,3927660..3927723,3927774..3927801,3927858..3927896,3927951..3928032))
AA seq 80 aa
MTSQLLPLELIDRCVGSPIWVIMKGDKEFSGTLLGFDDFVNMVLEDVTEHDYTGVQTKLP
KILLNGNNVCMLIPGGMPDQ
NT seq 243 nt   +upstreamnt  +downstreamnt
atgacttcacaactgctcccgctggagctcatcgacagatgcgtcggctcgcccatatgg
gtcatcatgaagggcgacaaagaattcagcggcactctgctcggctttgatgacttcgtc
aacatggtgctcgaagacgtgacagagcatgattacaccggcgtccaaacaaagctcccg
aagattctactcaacggcaacaacgtctgcatgctgatacctggaggaatgcccgatcaa
tga

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