Fulvia fulva: CLAFUR5_05335
Help
Entry
CLAFUR5_05335 CDS
T08195
Name
(RefSeq) ATP-dependent RNA helicase DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ffu
Fulvia fulva
Pathway
ffu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLAFUR5_05335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffu03041
]
CLAFUR5_05335
03009 Ribosome biogenesis [BR:
ffu03009
]
CLAFUR5_05335
Enzymes [BR:
ffu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLAFUR5_05335
Spliceosome [BR:
ffu03041
]
Complex A
U1 snRNP components
U1 related factors
CLAFUR5_05335
Complex B
CLAFUR5_05335
Ribosome biogenesis [BR:
ffu03009
]
Eukaryotic type
Pre-60S particles
Helicases
CLAFUR5_05335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hid1
Motif
Other DBs
NCBI-GeneID:
71985213
NCBI-ProteinID:
XP_047760366
LinkDB
All DBs
Position
4:join(6008408..6008694,6008784..6008848,6008905..6008918,6008980..6009132,6009264..6009396,6009465..6009574,6009691..6009858)
Genome browser
AA seq
309 aa
AA seq
DB search
MLGMILLVDDDQRRTNNEIVNCMRILTRVIPFIYEAQHLRDWHDSFFWEPRRPWSAEPKR
EIREDMHIGKPLGQETLEIVTNYLFFSGIGRLSYGTADPLPAGGKHEKNQQEVITSTGCL
LQLGVVLGSKHHSPAGFFTARHHVAPAACAARSHEQPSAPFSTPESPPTTHAFWKQMLDK
YTFVGDGFVDFTESRYIGNFLDAWMGQEREPGHQPEKHWHIAVSVGGACKEKWIAVKLLA
RIQRANDEKVWNRVEAPTVAARTPAEVDEFCRVNQIIIQGRRVPKSVETFDEAGFPNYVM
SEVKAQGFP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcatgatcttgcttgttgacgacgaccagcgccgcaccaacaacgagatcgtc
aactgcatgcgcatcctcacccgcgtgattccattcatctacgaagcccagcacctcaga
gactggcatgacagcttcttctgggagccccgccgcccatggtcggccgaacccaagcga
gaaatacgagaagacatgcacatcggcaagccacttggacaagagacgttggagattgtc
accaactatctcttcttcagcggcatcggcaggttgtcctacgggactgctgaccctctt
ccagcaggtgggaagcacgagaagaaccagcaagaggtcatcacgtcgacaggctgcttg
ttgcagcttggcgtcgtgttagggagcaagcatcactctcccgccggctttttcaccgca
agacaccacgtcgcaccggcggcgtgcgccgcacgaagccatgaacaaccatcggcaccg
ttcagcactccagagtcacccccgaccacgcacgcattctggaagcagatgcttgacaag
tacacctttgtcggcgacggattcgtcgacttcaccgagtctcgctacatcggcaatttc
ctcgacgcctggatgggccaagagcgggagccgggccaccagccagagaagcattggcac
attgccgtctctgttggcggcgcctgcaaagagaagtggattgcagtcaagctgcttgct
cggatacaacgtgcgaacgacgagaaggtgtggaatcgtgtggaggctccaactgtcgca
gctcgcacaccagccgaggtcgacgagttctgccgcgtcaaccaaatcatcattcaaggt
cgccgtgtgccaaagtcagtcgagaccttcgacgaggctggtttcccgaactatgtcatg
agcgaggtcaaggcacaaggcttcccgtag
DBGET
integrated database retrieval system
