Fulvia fulva: CLAFUR5_05532
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Entry
CLAFUR5_05532 CDS
T08195
Name
(RefSeq) Exosome complex component rrp45
KO
K03678
exosome complex component RRP45
Organism
ffu
Fulvia fulva
Pathway
ffu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLAFUR5_05532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_05532
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CLAFUR5_05532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
71985410
NCBI-ProteinID:
XP_047762348
UniProt:
A0A9Q8LIE3
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Position
5:complement(join(709037..709652,709713..709996))
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AA seq
299 aa
AA seq
DB search
MPREADPSNNEREFLLAALRENVRLDGRAFDQFRDVQLAFGEEYGVADVRVGKTRVMVNI
SAEVVTPYPDRKFDGVFIISTELSPIASPAFEVGRQDQTEVLLSRILEKTIRRSGALDTE
SLCIIAGSKCWHIRADIHVLDHDGNIVDVCCIALIAALMHFRRPDHEIHGEEVTVYGLRE
REPVKLQMQHQPFCITTSYYEGGEVMIHDATLLEEQCREGEIIISVNRFGEVCQIAKLGG
TPVDGLSILTCTNMAVEKAKMLDKLVKAQLEEDEKERDKGGLMAELSAENDRPQQQPIG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcgaagcagatccatccaacaacgagcgcgagttcctgctcgcggcgctgcgc
gagaatgtgcgactggatggacgtgctttcgaccagttccgcgacgtgcagctggcgttt
ggcgaggaatacggcgtcgcagatgtgcgggtgggcaagacgagagtaatggtcaacatc
tccgccgaggttgtgaccccctacccagaccggaagttcgacggcgtcttcatcatctcc
accgaactcagtcccatcgccagtccagcattcgaagtaggccgacaagaccagactgag
gtcctgctctcgcgtatcctggagaagacgatccgacgatctggtgccctcgacacggag
agcttgtgcatcatcgcaggctccaagtgctggcacatccgcgccgacatccacgtcctc
gaccacgatggaaacatcgtagacgtctgctgcatcgcgctgatagccgcattgatgcac
ttccgcagaccggaccacgagatccatggcgaagaagtcacagtctacggactacgagaa
cgagaaccagtcaagctccagatgcagcatcagcccttctgcatcacaacatcgtactac
gaaggtggcgaggtcatgatacatgatgccaccttactggaagagcagtgcagagaaggc
gaaatcatcatcagcgtcaaccgcttcggcgaggtctgccagattgcaaagttaggcggc
acacctgtggatggtctgagcattttgacttgcacgaatatggcagtggagaaggcaaag
atgctggacaagcttgtcaaggcgcagctagaagaggatgagaaggagagggacaagggt
ggactgatggcagagttgagcgcggagaatgataggccgcagcagcaacctattggatga
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