Fulvia fulva: CLAFUR5_05637
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Entry
CLAFUR5_05637 CDS
T08195
Name
(RefSeq) Helicase required for RNAi-mediated heterochromatin assembly 1
KO
K11701
helicase required for RNAi-mediated heterochromatin assembly 1 [EC:
5.6.2.5
]
Organism
ffu
Fulvia fulva
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ffu03036
]
CLAFUR5_05637
Enzymes [BR:
ffu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
CLAFUR5_05637
Chromosome and associated proteins [BR:
ffu03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
CLAFUR5_05637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
ZNFX1
AAA_11
AAA_19
AAA_30
UvrD-helicase
Viral_helicase1
ResIII
DEAD
IstB_IS21
PhoH
SLFN-g3_helicase
nSTAND3
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
71985515
NCBI-ProteinID:
XP_047762650
UniProt:
A0A9Q8P9I0
LinkDB
All DBs
Position
5:join(1055427..1055576,1055755..1056168,1056239..1056595,1056649..1059240)
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AA seq
1170 aa
AA seq
DB search
MFATRPRCAACIMYPAKAHMKLSGPLPIFQTTAFGASINCISEKVWSCRVRVMNEHLLER
FGRSKKGTRHETQRVEVWLQPAKLNSRIRDYFAGEAADGRKWLSRPEIPSSDELMDTDTN
SSASSDIVEIAANRPTGAFEDKQKYLETQYELLREDATRPLREAVFQLRAKPNAIEDDFQ
GQIGIYDKVHIYGTVLSTRGLAMRVTFSLIRCGKKIIWEQSKRLISGSLVVLTPADDMFQ
SKAIVATVAARPLTGLQQNPPEIDLFFARDEDLEIDPMKEFVMIEERSGFYEADRHTLVA
LQHMMKEHFPLSQHLVDVESQVRAPRYVQEHPKTNLTAALTNNKHETYENVDILKRWPAQ
PHSDLDASQLEALRTILTKQLAIVQGPPGTGKTHVSVQAIKIMLQNRHDDDPPIIIACQT
NHAVDQILRHIAHFEPEFIRLGGRSKDREVIKKRTLYEVRMLTSENPPSGCMFGMAKKKM
QDMQKEFGIILSPLKPEKKPLDHRILENFKVLSKAQADSLESGASQWVQEKKSNVNEAAR
SPFLIWLGDKLISVPPRQEPEEYGFDYEEADLEFEQLKELEAENAAKDDEEMEALKGISL
PLADNYTCRKIPGMSAKAKELLKQQDMWKIPEASRGAVYRYLQSEVKHQIAMAFRDKAKQ
YNEQAGKRRIGNWEKDEPHLKKAKVIGMTTTGFSKYRPLLAALQPKVVLIEEAAETLEAP
VAVTCIPSLQHLILVGDHQQLRPHTHVKSHEDKPYYLNISLFERMVNNNIQYNVLIKQRR
MIPEIRRLLYPIYKNRIKDHASVKDPEHRPNVPGMGGVNSFFFTHQWREQRDDQMSCLNP
EEAVMIVGLVEHLAYNGMEIEDITVLTFYNGQRKRILSKLRNSQTINAFGPHKFNVVTVD
SYQGEENKVVILSLVRSNEKNAIGFLNIDNRVCVALSRAQCGFYIFGNGMLLHNNSKTWK
TVTQIMSGKPLKKEQLDKDIPDYVPQRLGTEFPIRCSNHDQLFEVRDANDWDEINGGCEL
KCEGKLPCGHLCTLKCHPFSHEQANCTQCHSRVQTAEQPSTGSVTNGISGLSLHSRAESD
SSQSKSTESWQSYATQESTRVEKLRADYIPRAHRSDESGADPVVAATAEYNRRKLIRGLD
GEGSSSTGGTIRPGEADGKRKKYREIFARS
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaacacgaccaagatgcgcagcatgtatcatgtatcctgccaaagcacacatg
aagctctctggacccctccccatcttccagaccactgcattcggcgccagtataaattgt
atctcggagaaggtgtggagttgtcgcgtgcgcgtcatgaacgagcaccttctggagcgg
tttggccgctccaagaagggcacgcgccacgagactcagagggtcgaagtgtggctgcag
cccgcgaaactcaactctcgcattcgagattacttcgcaggtgaagctgctgatggccgg
aagtggctctcacggccagagatcccaagctcagatgagttaatggatacagacacaaac
tcatcggcctcatcagacatcgtagagattgcagccaacagacccacgggcgccttcgag
gataaacaaaagtacctcgagactcagtacgagcttcttcgtgaggatgcaacccgacct
ctccgcgaggcagtgtttcaactgagggcgaagccgaacgccatcgaagatgacttccag
ggccagatcggtatatacgacaaggtccacatctacggcacagtgctgtcgactcgaggc
cttgcgatgagggtcacattcagcctcattcgctgtgggaagaagatcatatgggagcag
agcaagcgcttgatctccggaagtctggtcgttcttacaccagcggacgacatgttccaa
tcgaaagccattgttgccaccgttgcagctcgaccattgacagggcttcagcagaaccca
ccagaaattgacttgttcttcgcacgcgatgaagacttggagatcgacccgatgaaagag
tttgtgatgattgaagagaggagcggtttctatgaggccgatcgacacaccttggtggca
ctccagcacatgatgaaagagcatttccctctctctcaacatctggtcgatgtcgaatct
caagtcagggctccacgctacgttcaggagcacccgaagacaaatctcactgccgcactc
acgaacaacaagcacgagacatacgagaatgttgacatcctgaagcgctggccagctcag
ccacacagcgacctcgacgcctcccaactcgaggccttgcggacgatcctcaccaagcag
ctcgccattgttcaaggtccacccggtaccggcaagacccatgtatccgtgcaagcgatc
aaaatcatgctacaaaaccgtcatgacgacgatccccccatcatcatcgcttgccagacg
aaccatgctgtcgatcagatccttcgccatatcgctcacttcgagccagagttcatacgt
cttggtggccgaagcaaagaccgcgaggtcatcaagaagcggacactctacgaagtccgg
atgcttacctctgagaacccaccatcgggctgcatgttcggtatggcgaagaagaagatg
caagatatgcaaaaggagttcgggatcattctgtcacctctgaagccggagaagaagcct
ctggaccatcgtatcctggagaatttcaaggtcttgagcaaagcccaggcggattctctg
gagtcaggtgcctcgcaatgggtgcaagagaagaagtcaaatgtaaatgaagctgctcgc
tcaccatttctgatatggctcggagacaagctcatttccgtaccaccgagacaggagcca
gaggagtatggcttcgactacgaagaggctgatctggaattcgagcaactcaaggagctc
gaggctgagaacgcagccaaggatgatgaagagatggaggccctcaaaggcatatcgctg
ccgctggccgacaactacacttgccgcaagattccgggtatgagcgccaaagcaaaggag
ctgctcaagcagcaagacatgtggaagataccagaagccagtcgaggcgccgtctatcgc
tatctccaatctgaagtcaagcatcagatcgccatggcatttcgcgacaaggcaaagcag
tacaacgagcaggcgggcaagcggcgaataggcaattgggagaaggatgagccccacctc
aagaaggccaaggtcattggcatgacaactaccggattctcaaagtaccgtccgctgctt
gccgcgctgcagccaaaggtggtcttgatcgaagaagctgccgagacgttggaggctccg
gttgctgtcacctgcataccatcacttcagcacctgatcctcgtcggcgaccaccagcag
ttgcgccctcatacgcacgtcaagtctcacgaggataagccttactacctgaacatctct
ttgttcgagcgtatggtcaacaataacatccagtacaacgtcctcatcaagcagcgacgc
atgataccagagatacgtcgtcttctgtatccgatctacaagaacaggatcaaggatcat
gcttcggtcaaggacccggaacatcgccctaacgtaccaggcatgggtggcgtcaactct
ttcttctttacccaccagtggagggagcagcgtgatgatcaaatgagctgcctcaacccc
gaggaggccgtcatgatcgtcggcttggtcgagcacctggcatacaacggtatggaaatc
gaagacattaccgtcttgaccttctacaacggtcagcgaaagcgcatcctgtccaaactt
cgcaacagccaaacaattaatgctttcggtccccataagttcaacgtggtcacagtggat
agctaccagggtgaggagaacaaggtcgttattctcagtcttgtcagatccaacgaaaag
aacgcgatcggctttctgaacattgacaatcgcgtctgcgtagcgctttctcgtgcgcag
tgcgggttttacatcttcggcaatggcatgctcttgcacaacaacagcaagacctggaag
actgtcacccagatcatgtcgggcaagccactgaaaaaggagcagcttgacaaagacata
ccagactacgtgccacagcgcctgggcacagagttcccgattcggtgctccaaccatgat
caactcttcgaggtgcgcgacgcgaatgattgggatgagatcaatggtggatgcgagctg
aaatgcgaaggcaagctaccatgcggacatctgtgcacgctgaagtgtcaccctttctcc
cacgagcaagccaactgcacacagtgtcatagccgggtgcaaaccgcagagcaaccatca
acagggtctgtgaccaacggcattagtggtctttcgctgcacagtagagcggagtccgat
tcatcccaatccaaatcgaccgagtcttggcaatcgtatgccacgcaggaatcaactcgt
gtcgagaagttgcgcgcagactacattccacgtgctcatcgctcggatgagtctggagca
gatcccgtcgttgctgccaccgcagagtacaatcgtcgcaagctcattcgcggcctcgat
ggcgaaggttccagcagcactggcggaactatcagaccaggcgaggctgacggcaagagg
aagaagtacagggagatctttgcgaggagctga
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integrated database retrieval system
