KEGG   Fulvia fulva: CLAFUR5_05775
Entry
CLAFUR5_05775     CDS       T08195                                 
Name
(RefSeq) Nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
ffu  Fulvia fulva
Pathway
ffu03013  Nucleocytoplasmic transport
ffu03015  mRNA surveillance pathway
ffu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ffu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CLAFUR5_05775
  09122 Translation
   03013 Nucleocytoplasmic transport
    CLAFUR5_05775
   03015 mRNA surveillance pathway
    CLAFUR5_05775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ffu03019]
    CLAFUR5_05775
   03041 Spliceosome [BR:ffu03041]
    CLAFUR5_05775
Messenger RNA biogenesis [BR:ffu03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     CLAFUR5_05775
Spliceosome [BR:ffu03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    CLAFUR5_05775
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 71985653
NCBI-ProteinID: XP_047762204
UniProt: A0A9Q8LI60
LinkDB
Position
5:complement(join(1397287..1397775,1397828..1397896))
AA seq 185 aa
MPAFKFQHTVDRLDKPSSYTIGKNKKQKNRRGNPNDEPAEDRDRSENQPDIEDKLKHATT
LYVGNLSFYTTEEQIHTLFSSCGEIKRLVMGLDRFSKTPCGFCFVEYYTHEDALDCLKYV
GGTKLDERIIRADLDEGFAEGRQYGRGRSGGQVRDEYREEYDPGRGGYGRAVQQGDRYYA
DEYDR
NT seq 558 nt   +upstreamnt  +downstreamnt
atgcctgccttcaagttccagcacaccgtcgaccgcctcgacaagccatcctcctatacc
attggcaagaacaagaagcagaagaacagacgcggcaaccccaacgacgagcccgccgaa
gaccgcgaccgcagcgagaaccagccagacatcgaagacaagctgaagcatgcgaccaca
ctctacgtaggcaacttgtccttctacaccaccgaggagcagatccacaccctgttcagc
tcctgcggcgaaatcaagcgtctggtcatgggactggatcgcttcagcaagacgccctgc
ggcttctgcttcgtcgagtactacacacacgaggacgcgctcgactgcctcaagtacgtc
ggcggcaccaagctggacgagcgcatcatcagagcagatctggacgaaggctttgctgag
ggcaggcagtacggacggggccgaagcggcggacaagtgcgtgacgagtaccgtgaagag
tatgatccaggacgaggtggatacggcagagctgtgcagcagggtgatcgttactacgcc
gacgagtatgaccgatga

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