Fulvia fulva: CLAFUR5_06648
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Entry
CLAFUR5_06648 CDS
T08195
Name
(RefSeq) Replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
ffu
Fulvia fulva
Pathway
ffu03030
DNA replication
ffu03410
Base excision repair
ffu03420
Nucleotide excision repair
ffu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLAFUR5_06648
03410 Base excision repair
CLAFUR5_06648
03420 Nucleotide excision repair
CLAFUR5_06648
03430 Mismatch repair
CLAFUR5_06648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ffu03032
]
CLAFUR5_06648
03036 Chromosome and associated proteins [BR:
ffu03036
]
CLAFUR5_06648
03400 DNA repair and recombination proteins [BR:
ffu03400
]
CLAFUR5_06648
DNA replication proteins [BR:
ffu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CLAFUR5_06648
DNA Replication Termination Factors
ELG1-RFC complex
CLAFUR5_06648
Chromosome and associated proteins [BR:
ffu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CLAFUR5_06648
DNA repair and recombination proteins [BR:
ffu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CLAFUR5_06648
Check point factors
HRAD17(Rad24)-RFC complex
CLAFUR5_06648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_24
AAA_22
AAA_30
AAA_5
AAA_16
AAA_assoc_2
AAA_19
AAA_11
PhoH
RuvB_N
SLFN-g3_helicase
RCF1-5-like_lid
DEAD
ResIII
AAA_3
DUF815
Sigma54_activat
AAA_14
DnaB_C
Mg_chelatase
IstB_IS21
TIP49
AAA_28
AAA_25
AAA_18
TK
nSTAND3
RNA_helicase
AAA_7
ATPase_2
NACHT
DNAX_ATPase_lid
TniB
VTC
bpMoxR
Motif
Other DBs
NCBI-GeneID:
71986526
NCBI-ProteinID:
XP_047763338
LinkDB
All DBs
Position
6:160252..161457
Genome browser
AA seq
401 aa
AA seq
DB search
MSDYEDNDDMDIDAPSKPSNDITFSSNNTDSKGKRSAANLPVELEDNLPWVEKYRPNSLS
DVSGHHDILATINKFVDTNRLPHLLLYGPPGTGKTSTALAMARRIYGNKNMRQMVLELNA
SDDRGIDVVREQIKTFSSTKQIFAGSFDKSSNQNDTLASYKLIILDEADAMTSTAQMALR
RIMEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKDADIRQLVDKVIAEEVVNIAP
EATDSLVTLSKGDMRRALNVLQACHASSTPLHVPGQPLKESKDVERDLITQETIYDCIAA
PHPGDIATITQTLLTTGNVGSCLSTINTLKKQKGLALADILTAMGDQLTEIDVPAQTRVT
WLEGLAEIEYRLSGGGSESVQTGGLVGVIRNGVGIMEKGKA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacgaggacaacgatgacatggacatcgacgctccatcgaagccatccaac
gacatcaccttttcctccaacaacaccgactcgaaaggcaagcgcagcgcagcaaatctt
cccgtcgagctcgaagacaatctgccatgggtagagaagtacagaccgaacagcctctcc
gacgtcagcggccaccatgatattcttgcaaccatcaacaaattcgtcgacaccaatcga
cttcctcatctcctgctttatggcccgcccggaacaggaaagacttccacagcactggca
atggcgaggagaatctacggcaacaagaacatgcgacagatggtgctggagctcaatgcc
tcggatgacagaggtatcgatgtagtgagagagcagatcaagacattcagcagcaccaag
cagatcttcgcgggatcattcgataagagcagcaaccagaatgacaccctcgcgagttac
aagcttattatcctggacgaggcggatgccatgacaagcactgcgcagatggcgttgaga
cggatcatggaaaagtacacagccaacacacgattctgcattattgcaaactatacacac
aagctcagtccggcactgctgtcgcgatgcacgcgatttcgattctcgccgctgaaagat
gccgacattcgacagctggtggacaaggtcatcgcggaagaggtcgtgaacattgcacca
gaagccacggacagtctcgtcacactttccaagggtgacatgcgtcgtgctttgaacgtg
cttcaagcatgccacgcatcctcgacacctctgcatgtaccaggtcagccgttgaaagag
agcaaagacgtcgaaagagacctcatcacgcaagagacaatctacgactgcattgctgca
ccacatcctggcgacattgctaccatcacacagacacttctcacgacaggaaacgtcggt
tcgtgtctcagcaccatcaacactctcaagaagcaaaaaggtcttgctctggcagatatc
ctcacagcaatgggcgaccagcttactgagatcgacgtgcctgcacagacaagagtcaca
tggctggagggtctagcggagattgagtaccgtcttagtggtggagggagtgagagtgtg
cagactggtggccttgtcggcgtcatcaggaacggcgttggaatcatggagaagggcaag
gcttag
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integrated database retrieval system
