Fulvia fulva: CLAFUR5_06830
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Entry
CLAFUR5_06830 CDS
T08195
Name
(RefSeq) 20S-pre-rRNA D-site endonuclease nob1
KO
K11883
RNA-binding protein NOB1
Organism
ffu
Fulvia fulva
Pathway
ffu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CLAFUR5_06830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ffu03009
]
CLAFUR5_06830
03051 Proteasome [BR:
ffu03051
]
CLAFUR5_06830
Ribosome biogenesis [BR:
ffu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CLAFUR5_06830
Proteasome [BR:
ffu03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
CLAFUR5_06830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Zn_ribbon_NUD
WRNPLPNID
MTBP_N
Motif
Other DBs
NCBI-GeneID:
71986708
NCBI-ProteinID:
XP_047763816
LinkDB
All DBs
Position
6:1259431..1260765
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AA seq
444 aa
AA seq
DB search
MASIQSDKPVNTVVLDTGAIIKNEPPVSTLLNQAETLVTVPAIISEIKDAATRSRVETTL
KPFLTIRSPNPTSIKFVTDFARKTGDLAVLSKPDIQIIALTYEIECERNGGDWRLRRVPG
QKGVNGAPPARVEAKAAEGSVVNEGATPETNAELAEIPADGGNVVTKQETDLEGQAEPIA
EGEEQTSPDDDVAQLTSDLEATGLDAEQDIPEDATETKVDSAQNSAEAQEESDSDSDGWI
TPSNLKKKQAADAGASTSQTPEPKTMQVAVLTSDFAMQNVILQMNLNLLSPSMTRIKQLR
TYVLRCHACFCVHKDLSKQFCSRCGQPSLTRVSCSTSANGEFKLHLKKNMQWNTRGDRYS
IPKPVHGSTNARRFHGGGKGGWGTELILAEDQKEAVRAGAVERRQKERSLMDEDYLPSIL
TGDRNRAGGRMKVGAGRNVNSKKR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcatacagagcgacaagccagtgaacactgtggtcctcgataccggtgccatc
atcaagaacgagcctccagtttcaacgctgctcaatcaagcagaaactctcgtgacagtt
cctgctataatcagcgaaatcaaggatgcagcaacgcgaagccgtgttgagactacattg
aagccattcctgacaattcgatcgccgaaccctacaagtatcaaattcgtgacggacttt
gcgcgcaagacaggagatcttgctgtgctcagtaagcccgatattcagatcattgctttg
acttacgagatcgagtgtgagcgtaatggtggcgattggcggttgcgacgagtcccaggc
cagaagggtgtgaatggcgcccctccggcaagggtcgaggcgaaggcagccgaaggctca
gtggtaaacgaaggtgcgacgcctgagaccaatgctgagctagcagagattccagccgat
ggcgggaacgtcgtaacgaagcaggagacggacctggaagggcaggcagagccgatcgcc
gagggcgaggagcagacttctcctgacgatgatgttgcacaacttacctccgacctcgaa
gcgacgggtctcgacgcagagcaagacatcccggaggacgcaacagaaaccaaagtagac
tctgcgcagaactcggcagaagctcaggaagagtccgactctgactcggatggctggatc
acgccgtcaaacttgaagaagaagcaagcagccgatgctggagcatcaacatcacaaact
ccggaacccaaaacgatgcaagtggctgtcttgacctcagattttgccatgcagaacgtc
atcctccagatgaacctcaacctcctatcgccttccatgaccaggatcaagcagctcagg
acatacgtcctgcggtgccacgcttgcttctgcgtccacaaagatctcagcaagcaattc
tgctcgcgctgcggtcagccatcactcacacgggtttcatgctcgacaagtgcaaacggc
gagttcaaactgcacctcaagaagaacatgcaatggaacacgagaggagatcgatacagc
atacccaagcctgtccacggctcgacgaatgcacgtcggttccacggtggtggcaagggc
ggctggggcaccgagttgatcttggcggaagaccagaaggaggccgtgagggcaggcgct
gtggagaggaggcagaaggagcgaagtctcatggacgaggactacttgccgagcatcttg
actggtgatcgcaatcgagctggtgggaggatgaaggtcggtgctggcaggaacgtgaat
tcgaagaagcgttga
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