Fulvia fulva: CLAFUR5_06997
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Entry
CLAFUR5_06997 CDS
T08195
Name
(RefSeq) Double-strand-specific pac1 ribonuclease
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ffu
Fulvia fulva
Pathway
ffu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CLAFUR5_06997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_06997
03009 Ribosome biogenesis [BR:
ffu03009
]
CLAFUR5_06997
03036 Chromosome and associated proteins [BR:
ffu03036
]
CLAFUR5_06997
Enzymes [BR:
ffu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CLAFUR5_06997
Messenger RNA biogenesis [BR:
ffu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLAFUR5_06997
Ribosome biogenesis [BR:
ffu03009
]
Eukaryotic type
90S particles
RNase
CLAFUR5_06997
Prokaryotic type
rRNA processing factors
CLAFUR5_06997
Chromosome and associated proteins [BR:
ffu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CLAFUR5_06997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
HALZ
dsrm
Myo5a
SOGA
Motif
Other DBs
NCBI-GeneID:
71986875
NCBI-ProteinID:
XP_047763766
UniProt:
A0A9Q8PBF6
LinkDB
All DBs
Position
6:complement(2076507..2077898)
Genome browser
AA seq
463 aa
AA seq
DB search
MDNPYNDRDRSSNRDRDRDRDRNRDHSRTYDDRNNKRSHDDEHDGRDKKRPKQDHHNNRN
GRPQQSQDGPSRNRNKKQEHRNDGGAERTPRQVDAIKDENRRLKAELNALKASIAHGDSN
IQNGNATSAQLSHSDAYAQLPAPQEILTDVALYTPFTVADGLPQLPPVTDEKLRAAVFKH
KSIYAQHQDGAEGIITYEKLEYLGDAYLELFASRLIYHRFPQLAAGQMSQDRETLVKNET
LARFSKAYGFDKKVQVDKSVKAQMEHDKANKGFNKVLGDVFEAYVAAVALSHEDGFAAAE
KWLTALWAPKVLELFHAHKSLLIHADGADPLTTFNPNAAQELSARIGNGRDCKLDYKVLP
TIELKDDHLGQNLWIMELYIDGYGHTHKLLARGQGANKKEAKAWAAIKAMHGENKYVVEE
CEAKCRKSREQHKAQKEMQVKQETQVKQEVPVKQEKDLVGSAS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggacaacccatacaacgaccgagaccgaagctcgaaccgcgaccgcgaccgcgaccgc
gaccgcaatcgagaccactcgcgcacttatgatgaccgcaacaacaagcgcagccatgac
gacgagcacgacggtcgcgacaagaagcgccccaagcaagatcatcacaacaaccgcaat
ggccgtccacagcaatctcaagacggcccatctcgtaaccggaacaagaaacaggagcac
cgcaatgatggtggagcagaacgtacacctcgtcaagtcgacgcgatcaaggacgagaac
cgccgcttgaaggcagagctgaacgcgctcaaggcaagtatcgcccacggcgactcgaac
attcagaacggcaacgctacctctgcccagctatcgcacagtgatgcctatgctcagctg
ccagcaccccaggagatcctcacagatgttgcgctctacacacccttcacagtcgcggat
ggccttccacagctgcctcccgtgactgacgagaagttgcgtgctgcagtcttcaagcac
aagtcgatctacgcgcagcatcaagatggcgcggagggcatcatcacctacgagaagctc
gagtatcttggcgacgcatacctcgagctgttcgcgtcacgcctgatctatcaccgcttt
ccgcaacttgccgcaggccagatgtcacaagatcgcgagacgctggtcaagaacgaaaca
ctcgcccgtttctccaaagcatacgggttcgacaagaaggtgcaggtggacaagagcgtc
aaagcacagatggagcatgacaaggccaacaaaggcttcaacaaagttctcggagatgtc
ttcgaagcttacgttgctgcggtcgcactcagtcacgaggacgggttcgcagctgccgag
aagtggctgacggcgctttgggctccaaaggtgcttgaattgtttcatgctcacaagagt
ctcctcatccatgcggatggtgccgaccctctcaccaccttcaaccccaacgctgcccaa
gagctgtccgcccgcatcggcaatggccgcgactgcaagcttgactacaaggtcctccca
acaatagagctgaaggatgatcacttgggtcagaatttgtggatcatggagctctacatc
gatgggtacgggcacacacacaagcttcttgccaggggtcaaggtgcgaacaagaaggaa
gccaaggcatgggcagccatcaaggccatgcacggcgagaacaagtacgtcgtggaggag
tgtgaggcgaagtgccgaaagtcgagagagcagcacaaggcacagaaggagatgcaagtc
aagcaagagactcaagtcaagcaagaggttccagtcaagcaggagaaggacttggtggga
agtgcatcttag
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integrated database retrieval system
