KEGG   Fulvia fulva: CLAFUR5_07157
Entry
CLAFUR5_07157     CDS       T08195                                 
Name
(RefSeq) ATP-dependent RNA helicase fal1
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
ffu  Fulvia fulva
Pathway
ffu03013  Nucleocytoplasmic transport
ffu03015  mRNA surveillance pathway
ffu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ffu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CLAFUR5_07157
  09122 Translation
   03013 Nucleocytoplasmic transport
    CLAFUR5_07157
   03015 mRNA surveillance pathway
    CLAFUR5_07157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ffu03019]
    CLAFUR5_07157
   03041 Spliceosome [BR:ffu03041]
    CLAFUR5_07157
   03009 Ribosome biogenesis [BR:ffu03009]
    CLAFUR5_07157
   03012 Translation factors [BR:ffu03012]
    CLAFUR5_07157
Enzymes [BR:ffu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CLAFUR5_07157
Messenger RNA biogenesis [BR:ffu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CLAFUR5_07157
   mRNA cycle factors
    Stress granule specific factors
     CLAFUR5_07157
Spliceosome [BR:ffu03041]
 Complex C
  Other components
   EJC/TREX
    CLAFUR5_07157
Ribosome biogenesis [BR:ffu03009]
 Eukaryotic type
  90S particles
   Helicases
    CLAFUR5_07157
Translation factors [BR:ffu03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    CLAFUR5_07157
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 Cas3-like_C_2 AAA_22 Flavi_DEAD TniB COG4_N UvrD-helicase
Other DBs
NCBI-GeneID: 71987035
NCBI-ProteinID: XP_047763467
LinkDB
Position
6:join(2856999..2857287,2857339..2858252)
AA seq 400 aa
MADEGIDRKAEEKMEFSTSQEVSVAPTFEAMHLKENLLRGIYAYGYESPSAVQSRAIVQI
CKGRDTIAQAQSGTGKTATFSISILQVIDTAVRETQALVLSPTRELATQIQSVLLALGDY
MNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVADMIRRRNLRTRHIKMLVLDEADEL
LNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLK
QYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMRDANFTVSSMHGEMP
QKERDSIMGEFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFG
RKGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLLS
NT seq 1203 nt   +upstreamnt  +downstreamnt
atggcagacgaaggcatcgaccgcaaggccgaggagaagatggagttctccacgtcccag
gaagtgagcgtggcgcccaccttcgaggccatgcacctgaaggagaacctgctgcgaggc
atctacgcatatggctacgaatcgccctcggccgtgcagtcgcgtgccatcgtccagatc
tgcaagggaagagacaccatcgcccaggcgcagtccggaacgggaaagacggcgaccttc
agcattagtatcctgcaggtcatcgacacggctgtgcgcgagactcaagccctcgtcttg
tcgcccacccgcgaactcgctacccagatccagtccgttctgctggcgctcggcgactac
atgaacgtgcagtgccatgcctgcattggaggaaccaacgtcggcgaggacattcgcaag
ctggactatggccagcacgtcgtctctggcacacccggacgagtagcagacatgattcga
cgacgaaacctgcgcacgcgacacatcaagatgctggtcctggacgaagcagatgagctc
ctcaaccgaggattcagagagcagatctacgacgtctaccgatacctgccaccagccacc
caggtcgttgtcgtgtccgccacactcccttacgatgtcctcgatatgaccaccaaattc
atgaccgatccagtccgcattctcgtaaagcgtgacgaactgacactcgaaggcctaaag
caatacttcattgcagtcgaaaaggaggagtggaagttcgataccctctgcgatctctac
gacacactcaccattacacaagccgtcatcttctgcaacacgcgccgcaaggtcgattgg
cttaccgacaagatgcgcgatgccaacttcaccgtgtcgagcatgcacggagagatgccg
cagaaggagagagacagcatcatgggcgagttcaggcagggcaacagcagagtactgatc
agcactgacgtctgggcacgcggcattgacgttcagcaagtcagcttggtcatcaactac
gacttgccgtcgaacagagagaactacatccaccgcattggtcgatctggaagattcgga
cgcaagggtgtggccatcaacttcgttactagcgaggatgtccggattctgcgtgacatt
gagttgtactactccacccagatcgacgagatgccgatgaatgtggcagatcttctgtct
tag

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