Fulvia fulva: CLAFUR5_07231
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Entry
CLAFUR5_07231 CDS
T08195
Name
(RefSeq) Pre-mRNA cleavage factor Im subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ffu
Fulvia fulva
Pathway
ffu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CLAFUR5_07231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_07231
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
CLAFUR5_07231
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
DUF4839
Motif
Other DBs
NCBI-GeneID:
71987109
NCBI-ProteinID:
XP_047763704
UniProt:
A0A9Q8PBB1
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Position
6:join(3181297..3181649,3181712..3182246)
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AA seq
295 aa
AA seq
DB search
MSPGACCCYMYQWFLKHCSIMSTVTPAHQLSSVPAKDILPFQSRQQPAVRLYPLSNYTFG
TKETQPEEDASVKDRLKRLEEYYEKHGMRRSCEAILVCHEHNHPHVLMLQIANAFFKLPG
DYIPHDVDEIEGFKTRLNDRLAPTGSLAEKDDHDWNVFDTLAQWYRPNFETFMYPFLPPH
VTRPKECKKLYFIQLPTEKVLSVPKNMKLLAVPLFELYDNSQRYGPQLSAIPHYLSRYRW
EFVDEDGKIVSWTPGGEVDERVKTKILAGGENGHAESGADPDVKMETKGEEPAAA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctggcgcgtgttgctgctacatgtaccaatggttcttgaagcattgctccatc
atgtcgaccgtcacacccgcgcatcagctatcgtcagtacctgcgaaagacatcctccca
tttcagagccgccagcaacccgccgtccggttatacccactcagcaactacacattcggc
accaaggaaacacaaccagaagaggatgcttcagtaaaagaccgactaaagcgactggaa
gaatactacgagaaacatggcatgcgaagatcctgcgaagccattctcgtctgccatgaa
cacaaccatccgcatgtcctgatgctgcaaatcgccaatgccttcttcaagctccctggc
gactacatccctcacgacgtcgacgagattgaaggcttcaagacccgcctgaacgaccgc
cttgcgcctaccggctctctcgccgagaaagacgaccacgactggaacgtgttcgacaca
ctcgctcagtggtaccgcccgaacttcgaaacattcatgtatccattcctaccaccgcac
gtaacgcgcccgaaagagtgcaagaagctgtacttcattcagctgccgacagagaaggtg
ttgtcagtacccaagaacatgaagctgcttgcggtgccgctgttcgagctgtatgacaac
agtcagaggtacgggccgcagctttctgcgataccgcattacttgagcagatatcgatgg
gaattcgtggatgaggatggaaagatcgtgagttggacacctggaggtgaggtggacgag
agggtgaagacgaagatcctcgcaggaggagagaacggacatgcagagagtggtgcagac
cctgatgtcaagatggagaccaagggtgaagaacctgcggcggcttag
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