Fulvia fulva: CLAFUR5_08720 Help Entry CLAFUR5_08720     CDS       T08195                                  Name (RefSeq) uncharacterized protein   KO K14401   cleavage and polyadenylation specificity factor subunit 1 Organism ffu  Fulvia fulva Pathway ffu03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:ffu00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     CLAFUR5_08720  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ffu03021]     CLAFUR5_08720    03019 Messenger RNA biogenesis [BR:ffu03019]     CLAFUR5_08720 Transcription machinery [BR:ffu03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      CLAFUR5_08720 Messenger RNA biogenesis [BR:ffu03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage and polyadenylation specificity factor (CPSF) complex      CLAFUR5_08720 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CPSF_A MMS1_N Motif Other DBs NCBI-GeneID:  71988598 NCBI-ProteinID:  XP_047759884 LinkDB All DBs Position 3:join(5931456..5934324,5934381..5935552) Genome browser AA seq 1346 aa AA seqDB search MQCYTELLPPTAVTHALSLPFLNAGANNLIVAKTSLLQVFNVATFDGRDKLVLVGEYSLS GTITNLARVKLPDTKAGGDALLLAFKDAKLSLIEWDQENHRISTISIHYYEGDNVVSQPF GPSLADCENILTVDPNWRCAALKFGTRQLAVLPFRQPDDELGVEEDEDAEPASATVKRTE SIAQNVNGVVEQTPYKASFVLALSTLLEDIRYTVDLAFLYGYRESTLGILSSSVQRSSAL LNVRRDVLEYRMFKLELEQGESTELQVVKQLPNSLWKVVCLPAPVGGALLIGTNSFVHVD QNAKVNSVAVNEFAKLESDRGMEDQSDLNLKLEGCSVEVLDAESRQLLVVLHDGSLVTIY FQLSGRSIQGLKVSRVASESGGDLIKAAPSCVARVDDNKVFVGSEDGASSLVRWSRHTTG LSKKRSHGQMLGQTGDEEEEEVVEDDDDDLYDAAPESKKRATSTDGVVETAPSFQIQDEL DSLGPINDICLGRSGEAQADRLQLMLGTGRGRSSRVSCLNRDIVPISARKSALGTAKSAW AVHAKRDDPEEDGYDNLLFAYDGQDTKIYDVDEVGYMERTAQEFEHEGETIDVQTLAKDT IIVQCRRSEIRTYDADLALSQIIPMVDEETDEEYGIVHLSFCDPYLLVIRDDSSVQVLQV QGKEIEPLEGEGDIAEKKWLSGSIHAGSLTKDEPVLFLLSAQGSMHIFSLPTLEPVYHAP ALPHLPPVLSSDMPQRRAGPREALTELLVVELGTNGVDMPYVLARTALDDLVLYEPFHHP ATASVDAWYTNLRFSKVPITYIPKYNEAIAQEESTRPPPLRCIEIGAYNAVTIPGSPPLL LVKEASSLPRVLEVKITNETNHVASLLPIHLDHCKMGFAALGVDGSLEEYHLPLSTWYGT GWSVQQVDLGPDDLEVRHLAYHENRGVYVVATCKDVDFYFAEDDHRHLGQSGGGQDDIAL RPQVKQYSIHTVSSKTHRIIGSYDMPYLEAITALKVMPLEVSELTHDNELRILISTAAMR GEDMPAKGAIMVFNLIDVVPEPDSPESGIQLHLDAREETKGAITALAPFPGGFVGTGQGQ KIMIRGLKEDGTCLPVAFLDAQCHTTTMKTLGKSGMWLAGDAWKGLWFGGFTEEPYKLTV LGKAPKTQMEVVAADFLPFDGALYILIVDADMDLHVLQYDPENPKSQNGMRLLHRSTFHL GHFATNMMLLPSSLNPFGENQTFTNGDTGDAPGESSPLFHVLTTSLTGSIGMITPLDESS YRRLSALQTHLTTILEHPASLNPRAYRAIESESFGGARGVVDGNIVRRINELGAARRADV LGRAGADNWSIRSDLEVVGGGGLGYL NT seq 4041 nt NT seq  +upstreamnt  +downstreamnt atgcagtgctatactgagctcctaccgcctactgccgtcacccacgcgctctccctccca ttcctgaatgcaggtgcgaacaatctcatagtcgcaaagacatccttgctgcaggtcttc aatgtcgcgacctttgatggacgcgataagctggtgcttgtcggggagtattcactatcg ggcacgatcacgaatctcgcgcgggtgaagttaccagataccaaggcaggaggcgatgcg ctgcttctggccttcaaggatgcgaaactgagcttgatcgaatgggaccaggagaatcac cgcatcagcacgatcagcatacactactatgaaggtgacaatgtcgtcagccagcccttt ggaccgagtctcgccgactgcgagaatatcctgacagtggacccaaactggagatgcgcg gcgttgaagtttgggacgaggcagctggcagtgttgcccttcaggcagccggatgatgag ctgggagtggaagaggatgaagatgcagagcccgcgtcagccacagtgaagaggacagaa tcgatcgcgcagaacgtcaatggggtagtggagcagacaccgtacaaggcatcctttgtg cttgctctaagcaccttactggaggacatacgatacactgtggatttggcatttctatat ggctaccgcgagtctacgcttggaatactgtcgtccagcgttcagcgatcgagcgcattg ctgaatgtgcgcagggatgtcctcgagtatcgcatgttcaaactcgagttggaacaaggc gagtccacagagctgcaggtcgtcaagcaactgcccaacagtctttggaaggtcgtatgt ctgccagcacctgtgggtggtgcgcttctgataggtacaaactcttttgtgcacgttgac cagaacgccaaagtcaattccgtcgctgtcaacgagtttgccaagctggagagtgatcgt ggaatggaggatcagtcagacctgaacctcaaacttgaaggatgcagcgtagaagttctg gatgccgagagccgtcaattgctggtcgtactacacgacggttcgctcgtgactatatac ttccaactaagtggccgtagtatacaaggtctgaaggtttcgagagtcgcttccgaaagc ggaggtgatcttatcaaagcggcgccatcatgcgtggcaagagtggacgataacaaggtg ttcgttggaagtgaggatggagcgtcttccttggtccgatggagccgacataccactggt ctgagtaagaagcgatcgcatggtcagatgctgggacaaactggcgacgaggaggaggaa gaggtggtcgaggatgacgacgatgatctatacgatgccgcgcccgagtcgaagaagcgt gctacttccacggatggcgtcgtggaaacggccccaagttttcagattcaagacgagcta gactccctcgggcccatcaacgacatatgccttggcaggtcaggcgaagcacaagcagac cggcttcaattgatgctaggtaccggtcgaggcagaagcagtcgagtatcgtgcctcaac cgcgatatcgtccctataagtgctcgaaagagtgctctcggtaccgccaagagcgcatgg gctgttcatgcgaaacgcgacgatcctgaagaagatggctacgataatcttctattcgct tacgacgggcaagacacgaagatatacgatgttgatgaggtcggttatatggagcgcacg gcacaagagttcgaacacgagggtgaaaccatcgatgtccaaacattagccaaggatacc ataatcgtacagtgtcgaagatcggagattcggacctacgacgcagacttagcgttgagc caaatcatacctatggtcgacgaggaaacagacgaagagtacggaattgtacatctttca ttctgcgacccatacctgcttgtcatccgtgacgatagcagcgtccaggtcctgcaggtg caagggaaggagattgaacccctggaaggggagggagacatcgcagagaagaaatggcta agtgggtcgattcatgctggtagccttaccaaagatgaaccagtcctcttcctgctcagc gcccaaggcagcatgcacattttcagtctgccaactctcgagccagtgtatcacgcccct gcactgccacacttgccgcctgtgttgtcttcagacatgccgcaacggcgcgctgggcct agagaagctcttactgagcttctcgtggtcgagttgggcacgaacggtgttgacatgccg tacgtgctcgcaaggacggctctggacgacctcgtgctctacgaacccttccatcatcca gcaacggcatcagtggacgcctggtacaccaatctccgcttcagtaaagtgccgatcact tacataccaaagtacaatgaagcgatagcccaagaggagtcaacgcggccgccgccactc cgatgcatcgaaatcggtgcgtacaacgcggtcacgataccaggatcaccgcctctccta ctggtgaaagaagcctcgagcctaccaagagtgctagaagtcaaaattacaaacgagacg aatcacgtcgccagcctcttgcctatacacctcgatcactgcaaaatgggattcgcggcg ttaggtgtcgatgggtcgctcgaagagtaccatctgccgttgtcgacttggtatggcacc gggtggagcgtgcagcaagtggacttaggccctgacgatctcgaggtccgccatttggcg tatcatgagaacagaggggtgtacgttgtggcaacgtgtaaggatgtcgacttttacttt gcggaggatgatcaccggcatctaggacaatctggtggaggacaagatgatatcgcactc cgaccacaggtgaagcaatacagcatccatactgtctcctccaaaacccatcgcatcatc ggcagctacgacatgccatacctcgaagccatcacagcgctcaaagtcatgcctctcgag gtctccgagctcacacacgacaacgagctccgcatcctgatcagcacagctgcaatgcgt ggtgaagacatgccagcaaaaggcgccatcatggtcttcaacctgatcgacgtagtccca gagcctgacagccctgagagtggcatacaactacatctcgacgccagggaggagaccaag ggagccatcacagcccttgctcccttccctggtggcttcgtgggaacgggacaaggtcag aagatcatgatccgcggccttaaggaggatggaacatgtttgcctgtcgcgtttctcgat gcacaatgccatacaaccaccatgaagacgctcggcaagtcaggcatgtggcttgccggc gatgcctggaagggtctctggttcggcggcttcacagaagaaccttacaaactgactgtc ttgggcaaggcgccgaagacgcagatggaagtggtggcggcggatttcctgccgttcgac ggtgcactttacatcctcatcgttgatgcagatatggatttgcatgtcctgcagtatgac ccggaaaacccgaagtcgcagaacggcatgagattgttgcacaggagcaccttccacctg ggccatttcgccacgaacatgatgctactgccaagctctctcaatcctttcggcgagaac caaactttcaccaacggggacacaggagatgcgccaggagagtcatcaccactcttccat gtcctgaccacctcactcaccgggtctattgggatgattacaccactggatgagtcgtcg tatcgacgtctgtcagcgctgcagactcaccttacaacgatcctggaacatcccgcttcg ctgaacccgcgtgcgtatcgtgcgattgagagtgagagttttggaggagcaagaggtgtg gtggatgggaatatcgtcaggaggatcaatgagctgggcgcagcgaggagagctgatgtg ctggggagggcgggcgcggataactggagtatacggagtgatttggaagttgttgggggt ggtgggttgggttatctctag

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