KEGG   Fulvia fulva: CLAFUR5_08934
Entry
CLAFUR5_08934     CDS       T08195                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ffu  Fulvia fulva
Pathway
ffu03020  RNA polymerase
ffu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ffu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CLAFUR5_08934
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLAFUR5_08934
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ffu03021]
    CLAFUR5_08934
   03400 DNA repair and recombination proteins [BR:ffu03400]
    CLAFUR5_08934
Transcription machinery [BR:ffu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CLAFUR5_08934
  RNA polymerase III system
   RNA polymerase III
     CLAFUR5_08934
  RNA polymerase I system
   RNA polymerase I
     CLAFUR5_08934
DNA repair and recombination proteins [BR:ffu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CLAFUR5_08934
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 71988812
NCBI-ProteinID: XP_047766132
LinkDB
Position
9:complement(join(599455..600066,600123..600203))
AA seq 230 aa
MSSDEISRELSRLWRVLRTTKQMCADRGYELTEAECNISLDEFRRQYADETGAPQRTRMA
FTARPSESMMQKYLPLQRPGQNDEGREPNIGTIHVEFSNEPNIGIKHIKQFAQTLSEKNY
YTGIFVSSVAPTPAAMKIIPSILPTVMEIFREEDLLVNISKHELVPKHVLLSPEEKKGLL
ERYRLKETQLPRIRWDDPMAKYLGLRRGQVVKIIRKSETAGRYASYRWCI
NT seq 693 nt   +upstreamnt  +downstreamnt
atgtccagcgacgagatttcccgtgagctgtcgcgactatggcgcgttctcaggaccacc
aagcagatgtgcgccgatagaggatacgaattgaccgaagcagaatgcaacatctccctc
gacgagttccgccgccaatacgcagatgagaccggcgcgccgcaacggacacgaatggca
ttcactgcgcgcccatctgagtcgatgatgcagaagtacctgcctctgcagcgacctggg
cagaacgatgaaggaagggaacccaacatcggcaccatccacgtcgagttctctaacgag
cccaacatcggcatcaagcacattaagcagttcgcccagactctctcggagaagaactac
tacaccggcatcttcgtcagctccgtcgcacctactccagcagcgatgaagatcattccc
agcattctgccgactgtcatggagatcttcagagaggaggatcttctcgtcaatatctca
aaacacgagcttgtgccaaagcatgtgctgctcagtccggaggagaagaagggcctgctg
gagaggtatcgcttgaaggagacgcagctgccgagaatacgatgggacgatccgatggcc
aagtacttgggtttgaggagaggtcaggtcgtcaagatcatcaggaagtcggagactgcg
ggacgatacgccagttacaggtggtgcatatga

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