Fulvia fulva: CLAFUR5_09291
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Entry
CLAFUR5_09291 CDS
T08195
Name
(RefSeq) General transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ffu
Fulvia fulva
Pathway
ffu03022
Basal transcription factors
ffu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLAFUR5_09291
09124 Replication and repair
03420 Nucleotide excision repair
CLAFUR5_09291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffu03021
]
CLAFUR5_09291
03036 Chromosome and associated proteins [BR:
ffu03036
]
CLAFUR5_09291
03400 DNA repair and recombination proteins [BR:
ffu03400
]
CLAFUR5_09291
Enzymes [BR:
ffu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CLAFUR5_09291
Transcription machinery [BR:
ffu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CLAFUR5_09291
Chromosome and associated proteins [BR:
ffu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CLAFUR5_09291
DNA repair and recombination proteins [BR:
ffu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CLAFUR5_09291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
nSTAND3
Motif
Other DBs
NCBI-GeneID:
71989169
NCBI-ProteinID:
XP_047765921
LinkDB
All DBs
Position
9:complement(2214436..2216832)
Genome browser
AA seq
798 aa
AA seq
DB search
MKFYIEDLPVLFPYPRIYPEQYAYMCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ
QFYPEARKLIYCSRTMSEIEKALAELKALMKYRADQLGEAEDFRGLGLTSRKNLCLHPSV
RREKSGSVVDARCRSLTAGFVKEKKERGEDVDLCIYHDNLDLLEPHNLIPPGVWTLDGML
QYGEQHKQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDN
VCIESLSIDLTEDSLRKAARGASNLEQKITEMKDTDAEKLQNEYAKLVEGLREADEARDE
GAFMSNPALPDDLLKEAVPGNIRRAEHFTAFLKRFIEYLKTRMKVLHVISETPPSFLQHL
KELTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQQVATFATLVATYDTGFLLILEPY
ESDSATVANPILHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLGFEAVVQESY
AMTLARRSFLPMIVTRGADQAPISSNFQRRNDPNVVKNYGQLLIKFSKLTPDGIVVFFPS
YLYMESVISMWQNMGILDDVWKSKLILVETPDSQETSLALETYRTACSNGRGAVLLCVAR
GKVSEGIDFDHHYGRTVLCIGIPYQYTESRILKARLEFLQETYRIKDSTFLAFDAMRHCA
QCLGRVLRGKDDYGIMVMADDRFKKRKEQLPKWIGSALMDADSNMSVDQAEAAAKKFLKQ
MSKPFPAHVQDGISTWSYEDLMAHKQKAEAEVERQERNGELNGDHHLHGDQIMAEAQAEE
EAMYNDPAMDAAMLELDR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctacatcgaggacctgccagtcctgttcccgtacccgaggatatatccagag
caatatgcatatatgtgcgacctcaaacgcacgctggatgctggcggccactgcgtgctc
gagatgccctcagggactggcaaaacagtatcacttttgtcgctgattgttgcataccag
caattctacccagaagcgcgcaagctgatctactgctctcgaacaatgtccgaaatcgag
aaggcgcttgcggagttgaaagctcttatgaagtatcgcgctgatcaacttggagaagcg
gaagactttcgcggtcttggtttgactagtcgaaagaacctgtgccttcatccttcggtt
cgacgcgagaagagtggatctgtggtcgatgcacgttgtcgaagtctcacagctggcttc
gtcaaagagaagaaagagcgtggcgaagatgtcgatctgtgcatttaccacgataacctc
gacttactcgaacctcacaatctcattccaccgggtgtttggacgcttgacggtatgctg
caatacggcgaacagcacaaacagtgcccatacttcacagcacgacggatgatgccgttc
tgtaatgtaatcatttactcgtaccactatctcctggacccaaagattgccgaaagagta
tcgaaggaactctccaaagactgcatcgtggtgttcgacgaagctcacaacatcgacaat
gtatgcatcgagtctctcagcatagacttgactgaagactctcttcgcaaagctgcgaga
ggagccagcaatttggagcagaagattacggaaatgaaagataccgatgctgaaaagctt
cagaacgaatacgcaaagcttgttgaaggtcttcgcgaggcagacgaggcacgagacgaa
ggagccttcatgtccaatccggcactaccggacgatctgctgaaagaagccgtgcctggc
aacatcaggcgagcagaacacttcactgcattcttgaagcgcttcatcgagtatctcaag
actcgaatgaaagtcctccatgtcatctcggagactccaccttcgttcttacagcacttg
aaagagctcacattcatcgagaagaagcccttgcggttctgcgcagaacgactcacatcg
ctcgtacgaacgctagagctgacgaacattgaggactaccagcctttgcaacaggtggcg
actttcgcgacacttgtggcaacatatgatactgggttcctactcatactggagccttac
gaatcagattcagcaacggtggcgaacccaattctgcacttcacatgtcttgatgccgca
attgccatcaaacctgtttttgatcgattcagctctgtcatcatcacttctggaacaatt
tcgcctctcgagatgtacccaaagatgcttggcttcgaggcagtcgtgcaggagtcatat
gccatgacattggcgagaaggtcgttcttgcctatgattgtgactcgaggtgcagatcag
gctcctatctcatccaactttcagagacgcaacgaccccaatgtcgtgaagaactatgga
cagctcctcatcaagttttccaagctcactcccgatggtattgtggttttcttcccgtcc
tacctctacatggagagtgtcatctcgatgtggcagaacatgggaattctcgacgatgtg
tggaagagcaagcttattctggtggaaacacctgatagtcaagagacttcacttgcgctg
gaaacataccgaacagcgtgcagcaatggcagaggcgccgtcctgctgtgtgtcgccaga
ggcaaggtctctgaaggcatcgatttcgaccatcactacggcagaactgtgctttgcatc
ggcattccctaccagtacacagagtcaagaattcttaaagctcgcctcgagttcttgcag
gagacttatcgcatcaaagattcgacattcttggccttcgatgctatgcgacattgtgct
cagtgtctgggacgtgtcttgcgtggcaaagatgactacgggatcatggtgatggcagat
gaccggttcaagaagaggaaagagcagctgcccaagtggataggcagcgcgctcatggat
gccgactccaacatgtctgttgaccaagccgaggccgctgccaagaagttcttgaagcag
atgagcaagccttttccagcacatgtgcaagatggcatcagtacttggagctatgaagac
ttgatggcccacaagcagaaagcagaggctgaagtggagcgtcaagagaggaatggtgag
cttaacggcgaccatcacctccacggcgatcagatcatggctgaggcacaagctgaggaa
gaggcgatgtacaacgatccggccatggacgcagcaatgctagagcttgatagatag
DBGET
integrated database retrieval system
