Fulvia fulva: CLAFUR5_09346
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Entry
CLAFUR5_09346 CDS
T08195
Name
(RefSeq) U3 small nucleolar RNA-associated protein 20
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ffu
Fulvia fulva
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ffu03009
]
CLAFUR5_09346
Ribosome biogenesis [BR:
ffu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CLAFUR5_09346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_N
DOP1_C
RNA_bind
RIX1
Motif
Other DBs
NCBI-GeneID:
71989224
NCBI-ProteinID:
XP_047765964
UniProt:
A0A9Q8PFM2
LinkDB
All DBs
Position
9:complement(2354428..2362035)
Genome browser
AA seq
2535 aa
AA seq
DB search
MSSMSRGKAGKAAKAYKVVKPKKSTKHTTPHTRNHRFKSFNDRIASLKIDPVRRRRYVEG
EEKEQESTHTYFGTSLEQWKDTNLSATFTSFAKEVSPLCDNLAVVLYNEEKIMDVLVKYI
EKADALAMEPLLNLLSQFAHDLDTKFEVHFQRAVATVTAVAAKHSDFAVIEWSFTCLAWL
FKYFSRLLTPDLRPLYDLIAPYLGKEAQKPFIVRFTAEALSFLVRKAALVYEKDKEPLDL
IMEHMLQDCVATPSDSTASLQQQGVMTLLTEAIKGIQNGVHASASAVLSCLFRSAGGLAT
TESQSMDKIATGILTSLIHSCNPEGFAPVLDTTLNYVGSSSKTSGFSIRFCASLLFTVVS
VRKGTRIQDWKPITKLAQEHVAKCQELEVIEAQTVSPVLGLLSVSMQTATIDAVLSIRQV
VDVVRTGKLAPFFIQFCDMVSRLGKERFENFVLPAFQKFVLDAAQEGDMGLYSLIPRVAL
RTQDAKLKCPHNMLRSIIDDLKQLTGQHTTDSHELLARANLKLKALVCLTLSEETKQALR
SSLLKLVHRALENTEPPSTSFCDFALSVGFEQLLHLQENETALESLWIKLCNASPNYIGL
SKFWSNLLRYVKSHKPNDLGGSHLEALDKALVSCLASSSHSIRQDTLDIISMLYQLRGKE
ATNLLSIAVTIESIPITLETERSLSMNIRRLAPAYSICNDDLLLRAIPKYCFGLLHLRLS
KAWDDATTALAGIVETKAGEEAVMEMVQAWLDSKPDFQSDDDEVPAVLDVDTDGFKVFSD
FECPNLAKLAAITEQVFLQPTSGLPAPAKQLSIDQERSPIVTATARSQALRVLNKMPQLA
EKRSRILVPILLKWAGTADEMDPESEGGRWSRKDQKALLAIFAQFGNPKVLYKSDEVYSA
LLALSANGDVEIQRSALKAIMAWKNKSVTRYEEHLNNLLDEDRFREELSVFLREEVDEEE
GISSEDHTHLMPVMLRLLYGRAVSGGKEGQSGRRKAIFVALSRFGNNVLEQFIDIALSGT
AKDHAGADTDFVQEPKAPLRQQFGMLNMINDMLQVLGAELEPSATKQVQGILSCTVSASR
RLDQDDQQSEASLLRTIRSAGMQCLVKTFDTMSGQDLKRYGKIIVDDLLVPRLERFANEN
AQGVSGTLRLFAAWSARNATIELLTSADGKILHSIAHLLQRQHTKDEVRVFILKEILDNL
VQQDLDHTVLQPHVSSFVTAIGAIIKGQPSKAVLDASVQSFAKLAAEISSGDEAADVTKT
CTGLLTKPSKDVSPWTKTGLLRTLLPLVQRSDVPVKDELYSALSGLFSRLRGVESRALLA
QVLATLVKDDEVLARAAKACEDMNAMGTRLDEPNHERREQAFTWIYESSNAMSLEQWLPV
VHNCLYYIRDSEDRVNRSSASHALQLFVDAAAQHIEDDDWKVLLDDAVYTGIEHGVKEQS
ELVRAEYLQVLGHLVEKLSTWQKVSNMYTLAVGGDEEASFFNNILHIQQHRRLRALRRLT
EEAGNLSSSNVSRILLPLLEHFVFDAIEGDSGRTLTDQAVQTIGALATVLNQSAFRATFK
RYTAYLKSKVELEKTVLRLLGAMVDGARASQSSDGAEDPASDATTAKASVLSSKAVISEQ
LPPLLAYLHQKDESTVDRRMPVAVTIVKLMLALPENEFAARLPAVLTDVSHVFRSRSQEA
RDETRKALKAVSSLVGPNYFSFILRELRSALKRGYQLHVLSFTVHALLVDAKLSPGDLDE
CLPDLMAVIMDDIFGVTGQEKDAEEYKSGMKEVKSSKSYDTMEHLARITPIRKLGELVRP
IRSLLSERLDLKSLKKIDELLTRLRKGVDENPASDSRDMLSFCWEIVSQVYQEEAAVPAA
QTLFDERRKRFLVQLEAPKGLHEKSTTTSYRFKLVSFALNLLRKALRRHEDLQTPQNLAG
FLPMAGDALIQGQEEVKLSAVRLLSTIMRVPIKKLDDNAPVYVKEAVAMIKGAPNMTTDS
VKAALELITSVLREKRTVEVKEKDMALLLKRLKTDIDEPDRQGVIYKFLRSVLGRKILIT
EVYELMDEVGKAMVTNPDRSIRESARSAYLQFVMEYPQGKDRWQKQTSFLVGNLQYQHAS
GRQSVMEFLHQMLGKIGDDVLAETSPRIFVSLLPVLVSDTDNNCRDMAKLLVGRIFERAG
GEQLKQFLTMMETWLKPEKKAAIKAGALQCWSVLMRSQTLPQKQLESLRDKLEDILSDFA
NEETIEQPRLILDTLQAMSVLVETAPAVGLGRDCADLWKILQKLPARDSVEVQESVATLL
GKFFDDIASYSSKTEYKLAGLPLRGSGGVELGAEDMRSLRAVNLQALRAISLGTSETLTV
QIIRNLVFLGRCFDANQMPSSDNVDQESDEEEASEEDSQVPNKTALANLLRRLSSMLMAD
KFSVMSRTTALQTVAALINQIENIPDLQVVLRPLYALTDPTVPKPPGDLYKALEDKARET
MDLIQKKIGSQAYVAALASARTEAKNRRDERRQKRRIEAVSAPEKWASGKKRKYEAKKVK
IKAKGQEARGMRRGW
NT seq
7608 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccatgtccagaggaaaggccgggaaggctgcaaaggcctataaagtggtcaag
ccgaagaagagcacgaaacacacgacgccacacacccgaaaccaccgcttcaagtccttc
aacgaccgaatcgccagcctgaagatcgatcctgtgcgccgacgacgatatgtagagggt
gaagagaaggagcaggagagcacacacacctacttcggcacttctttggagcaatggaag
gacacaaacctttcagcgactttcacgtcgttcgcgaaggaagtttcgccgctttgcgac
aatttggctgtggtgctgtacaatgaggagaagatcatggatgtactggtcaagtacatt
gagaaggcagacgcactcgctatggagccgctgttgaatctactctcccaattcgctcat
gatttggacaccaagtttgaggtgcacttccagcgagcagtagctacagtgacagctgtc
gcagcgaagcattccgactttgctgtcatcgagtggagtttcacctgtctggcatggctg
ttcaagtatttctcgcgacttctgacaccggatctgcgaccactgtacgacctgatagca
ccatatctgggaaaggaagcacagaagcccttcattgttcgcttcacggcagaagcactg
agctttctggtccgaaaggcggctttggtgtatgagaaagataaggagcccttggatctg
attatggaacatatgctgcaagactgtgtcgcgacaccatcggactcgaccgccagcttg
caacaacagggtgtgatgacactgctgacagaggcaatcaaaggcattcagaatggcgtc
catgcgagtgcgagtgcagtcttatcgtgtctgtttcgcagcgctggtgggcttgcaacg
acagagagtcaatctatggacaaaattgcgactggtatactgaccagcttaatccactct
tgcaacccagaaggatttgcgccggtcttggacactacgttgaattacgtcggaagctca
tcgaagacttcaggtttcagcattcgcttttgcgcttcgttgctgttcacagtagtgtca
gtgcgcaagggcactcgaatccaggactggaagccgatcaccaagttggcgcaagagcat
gtagcaaagtgccaggagctcgaagtcatcgaagctcaaacagtgtcgcctgtgttgggg
ctgctgtctgtgtccatgcagaccgccacgatcgatgcagtgctttcaatccggcaagtt
gtggatgtggtccggaccggaaagctggctcctttcttcatccaattctgcgatatggtc
tcaaggctggggaaggagcgcttcgagaacttcgtactgccagcttttcagaaatttgtt
cttgatgcagcgcaagagggcgacatggggctatactcattgatcccacgtgttgcactc
aggacgcaggatgcaaagctgaaatgtccgcacaacatgctcagaagcatcatcgacgat
ctcaagcagcttaccgggcagcacacaacggatagccacgaactccttgcgcgagctaat
ctgaagctgaaagccctggtgtgcttaaccttgagcgaggagactaagcaagccctcaga
tcttctttgctcaaattggtacacagggcgctcgagaacaccgagcccccatcgaccagc
ttctgcgacttcgcgctcagtgtcggctttgaacagcttttgcatctgcaagagaacgaa
accgcactggaaagcctctggatcaagctgtgcaatgctagtccgaactacattggactg
tcgaaattctggagcaatctgctacggtacgtgaagagccacaagccaaacgatcttggt
gggtcccatcttgaagccctagataaagcactcgtgtcatgtttggcgagctcttcgcac
tcaattaggcaagacactttggacatcatctccatgctgtaccagctgcgtgggaaggag
gcaacaaaccttctctcgatcgcggtcacgattgagtcgatccccatcacgctcgagact
gaacgatcattgtccatgaacatccgaaggctggcacctgcatattcgatctgcaacgac
gatcttctactccgtgcgattccaaaatactgcttcggcctcttacacctccggctgtcg
aaggcatgggacgatgcaacaactgcattggccggcatcgtagagacgaaggctggtgaa
gaggccgtcatggagatggtacaagcctggcttgactctaagcccgatttccaaagcgac
gacgatgaggtgcctgcggtcctcgacgtcgatacagatggcttcaaggtattctccgac
ttcgagtgtcccaaccttgcgaagcttgcggcaataaccgaacaggtgtttctgcagcca
acaagtggtcttccagctccagcaaaacagctatcaatcgaccaagaaagaagtcccatt
gtaaccgcaactgctcgaagccaggcactgcgagttctgaacaagatgcctcagcttgct
gaaaaacggtcgcgcatacttgtgcccattttgttgaagtgggcaggaactgctgatgag
atggatccagaatctgaaggcggccgctggtctcgtaaggaccaaaaagctctgctggcc
atcttcgcgcaatttggtaatccgaaagtgctttacaagagcgacgaagtgtacagcgct
ctgctggctctatccgccaacggtgatgtggagatccaacgatctgcgctcaaagcgatc
atggcatggaaaaacaagtcagtgacgcggtatgaagagcatctcaacaatctgcttgat
gaagaccgctttcgtgaagagctctccgtcttcttgcgcgaggaggttgacgaagaagaa
ggcatcagttcggaggatcacactcatcttatgccggtcatgctaagactcttgtatggc
agagcggtctctggaggcaaagaaggacagtctggtcgccgtaaagccatattcgtggct
ctctctcgtttcggcaacaatgttttggagcagttcatcgacattgcgctttcgggcaca
gccaaggatcacgctggagcggatactgacttcgtacaggagccgaaagcacctttgcga
cagcagtttggtatgctcaacatgatcaatgacatgctacaggtactgggtgcggagctg
gaaccgtcagccactaagcaggtccagggcattttgtcctgcacagtgtctgcctcgcgg
agacttgaccaggatgatcagcagtcggaagcatcgttgctgcgtactatccgctcggct
ggtatgcagtgcctagtcaagacatttgacaccatgtctggccaagacttgaagaggtac
ggaaagatcattgtcgacgacctgcttgtgccccgactggaaaggtttgcaaacgagaac
gcgcaaggcgtgtcaggcactttacgactgtttgccgcatggagtgctcgtaacgctaca
atagagcttttgacttccgcagatggcaagatcttgcattccatcgcccacctgttgcaa
agacagcataccaaggatgaagtgcgcgtcttcatactgaaggagattctcgacaacctg
gtacagcaagacttggatcacaccgtacttcagccacacgtctctagcttcgttactgca
attggagccatcatcaaaggacaacccagtaaagctgttcttgatgctagtgtccagtcc
ttcgcaaagctggctgccgagatctcatctggtgacgaagctgcggatgtgaccaagacg
tgcactggcctgctcaccaaaccgagcaaagatgtttctccttggacgaagactggcctc
ctacggaccttgctgccacttgtgcagcggtccgacgttcctgtgaaagatgagctctac
tctgcactaagcggccttttctctcggcttcgaggcgtcgaaagtcgtgctttgctggcg
caagtacttgcaaccctcgtcaaggacgatgaggtgcttgctcgggcagcgaaggcctgc
gaagacatgaatgctatgggaactcgccttgacgagccaaaccacgaacgtcgtgaacaa
gcatttacttggatctacgaatcatccaacgcaatgagcttggagcagtggctgcctgtg
gtgcacaattgcctctactacatcagagattcggaagatcgtgtcaataggtctagtgca
tctcatgccttgcaacttttcgtcgatgctgctgctcagcacattgaagacgatgattgg
aaggtgcttctcgatgatgcagtctatacgggcatcgagcatggcgtaaaggagcaatcc
gagcttgttcgagccgagtatctccaagtgttaggacatctcgtggagaagttgtcgaca
tggcagaaggtcagcaacatgtacacactggcggtgggcggagacgaggaagcttccttc
ttcaacaacatccttcacatccagcagcatcgccgcctgagagccctacgacgacttacc
gaggaagcaggcaatctcagttccagcaacgtatcgcgaatcttgctacctttgctcgaa
cacttcgtcttcgatgcgatagagggcgactccggtaggacgttgacggatcaagcagtg
cagaccatcggtgctttggcgacagtcctaaatcagtcggctttcagggccacctttaag
agatacaccgcctacctaaagtcaaaggttgagctcgagaagaccgtcctaagacttctt
ggtgcgatggtcgatggtgcaagggcatcgcagtcgtccgacggtgccgaagatcctgct
tcggacgctacgactgcaaaggccagcgtactctccagcaaggcggtgatcagcgagcag
ttgcctccacttctagcgtatctgcaccagaaggacgagtccacggtcgatcgtcgtatg
ccagtagccgtcaccatcgtgaaactcatgctcgcactgccggagaatgagttcgcagcg
cgactgcctgctgtgttgacagacgtatcacacgttttccggagtcgcagccaagaggct
cgcgatgagacgcgaaaggcgctcaaggccgtttcatcgctagtcggccccaactacttc
agcttcattcttagagagctgcgaagtgcgctgaagcgtggatatcagctgcacgtgctc
tctttcaccgtgcatgccctcctggtggatgccaagctctcgccgggagatcttgatgaa
tgcttgccagatctgatggccgtcatcatggacgacattttcggcgtcactgggcaagaa
aaagacgcagaggagtacaagagcggcatgaaagaggtcaagagcagtaagagctatgat
acgatggaacatcttgcccggattacacctattcgcaagctcggagaactcgtccgaccc
attcggtcacttttgtcagaaagacttgacttgaagtcgctcaagaagattgacgagctt
ttgacgcggcttcgcaagggcgttgacgagaatcctgcctcagacagcagggacatgctc
agcttttgctgggagatcgtcagtcaggtctatcaagaggaggcagcagtacctgccgcg
cagacgctgttcgatgagcgtcgcaaacgattcctggtacagctagaagcacccaaaggt
ctacacgagaagagtacaacgacatcgtaccgtttcaagttggtcagctttgctctcaat
ctgctccgcaaagcccttcggcgccatgaagatctgcagactccgcaaaacttggctgga
tttttgcctatggcaggcgatgctctcatccaaggccaagaagaggtcaagctatcggca
gtgcgactgctctcgacgatcatgcgtgtccccatcaagaagctcgatgataatgcacca
gtctacgtcaaggaggctgtagctatgatcaagggtgcaccgaacatgactacagattct
gtcaaggctgcccttgagctcatcacgtcagtgctccgtgagaagcgtactgtcgaagtg
aaggagaaagacatggctcttctgctcaagcgactaaagaccgacatcgatgagccagat
cgacagggcgtcatttataaattcttacgctcggttcttgggcgcaagatcttgatcact
gaagtctacgagctcatggacgaggttggcaaagctatggtaaccaatcctgatcgatcc
attcgtgaaagtgcaagaagcgcctacctgcaattcgtcatggagtatcctcaaggcaaa
gacagatggcagaagcagacatcgttcctggtcggcaatctacaatatcaacacgcttct
ggtcgacagagcgtcatggagtttctgcatcaaatgcttggcaagattggtgacgacgtg
cttgctgagacaagtccaaggatcttcgtttcgttgctgccggtactggtcagcgatact
gacaacaattgtcgcgacatggcaaagcttctggtcggcaggatctttgaacgtgctggc
ggtgagcagctcaagcagttcctgaccatgatggagacttggctgaagcctgagaagaag
gcagcgatcaaagctggtgccttgcagtgctggagtgtcttgatgcggtcccagacattg
cctcagaagcagctcgagagtctacgggataagctggaggacatcttatctgacttcgcc
aacgaagagaccatcgagcagccaagactgatcttggacacgctgcaggctatgtcagtg
ctcgtcgagacagcgcctgctgtaggtctaggcagggattgtgctgatctatggaaaatt
ttgcaaaagttaccagcccgcgacagtgtggaagtgcaagagtccgttgccactctactt
ggcaaattcttcgacgacatcgccagctacagttcaaagaccgagtacaaactggcaggg
ctgccattgcgaggctctggaggcgtggaactgggcgctgaagatatgcggagccttcgc
gctgttaatctacaggcactgcgggcaatctcattaggcacaagcgagacactgactgtg
cagatcatccgcaatcttgtcttccttggtcgctgcttcgatgctaatcagatgccatcg
agcgacaacgtggaccaggagtccgatgaagaggaagccagtgaggaagactcccaggtg
cccaacaagaccgctctcgcaaacctcctccgccgcctgtcctccatgctcatggctgac
aagttttccgtcatgtctcgcacaacagcactacagaccgttgcggctctgatcaaccag
attgagaacatccccgatcttcaagtcgtccttcgaccgctctacgcactcacagatcct
actgtgcccaagccaccaggcgatctctacaaggcgctcgaggacaaagctcgagagaca
atggacctcattcagaaaaagattggttcacaagcgtacgttgccgccttggcttcagcg
aggaccgaggcgaagaacagacgtgatgagaggaggcagaagaggcgcattgaggcagtc
agtgcgccggaaaagtgggcgagtggcaagaagaggaagtatgaggccaagaaagtcaaa
attaaggcaaagggccaggaggcgagaggtatgaggagagggtggtag
DBGET
integrated database retrieval system
