Fulvia fulva: CLAFUR5_09469
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Entry
CLAFUR5_09469 CDS
T08195
Name
(RefSeq) DNA-directed RNA polymerase I subunit rpa1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ffu
Fulvia fulva
Pathway
ffu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLAFUR5_09469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffu03021
]
CLAFUR5_09469
Enzymes [BR:
ffu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLAFUR5_09469
Transcription machinery [BR:
ffu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
CLAFUR5_09469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Rav1p_C
Motif
Other DBs
NCBI-GeneID:
71989347
NCBI-ProteinID:
XP_047765819
UniProt:
A0A9Q8PFC3
LinkDB
All DBs
Position
9:3021810..3026957
Genome browser
AA seq
1715 aa
AA seq
DB search
MNISQPVSSQLQGVSFGCLSKKDISALSAKRITNATTFDTLLNPVPGGLYTSELGQFGDN
PCGTCGLKNPQCPGHPGHIELPVPCYHPTFMEQVLRLLRAACIYCGKLKLKRVLVARYIC
KLRLVRYGLLKELTELDEVEYRSVKGQQTAASGSEDDDDDEGDADVKAITQQFEQFTKDS
IRRAKKAGTLGEAKTEVIKNARTAITRQFMADIVKGKKCGNCGGINHTYRKDRFVKIFRK
KLSEKDHVAMVQQGKKAKDPVVEMQKLKRAERSRKRKRDMDEGVADMDISSEEEGDDVDM
DESSEGEPEIAGGNLVDEASEERSSSTKTSSKSDQDYINPSQVKAHLEQLFDRDAEIMNL
VYGVDLKKSTERLSADMFFLESVIVPPNRYRPEAKTSSTEISEAQENGLYKDIITTSESI
TAIQRELTTKEPQTVSRYRARTYADLENAWLQLQENVNVVIDRNLSPLQGRAGARNADGV
KQKLEKKEGMFRKYMMGKRVNFAARTVISPDPNIETNEIGVPPVFAVKLTYPEPVNQHNY
EDMQQAVKNGPHVWPGAVAIESETGAVLNLANKTADERLALANSLLAPSVGSNVHGARPK
KVHRHLNNGDIVIMNRQPTLHKPSMMCHKARVLPGEKTLRMHYANCNTYNADFDGDEMNM
HFPQNELARAEALLIADTDHQYLSGTAGNPLRGLIQDHISMCVWLTNRDLFFERGEYMNL
LYSALRPEDRHTESNRLETVPPAIIKPKPLWTGKQVISTVLKNLQPAGTAGLNMTGKSTT
AATMWGEHGKEEGVVIFKDGELMQGILDKKQIGPAAGGLVNAVYEAYGYRAAGRLLSILG
RLLTKLLHMRAFSCGVEDLIFTRKGEEDRRAALAGADSVGLKVAAKYVSLEDQKPKSDDR
ELRKRLEDVLRDDDKMQGLDSLMNNSTRDLSGDVSNRCMPAGLTKPFPKNQMQTMTTSGA
KGSKVNVNLISCNLGQQVLEGRRVPVMVSGKTLPCFKPFESSVRAGGYIVDRFLTGIRPQ
EYFFHAMAGREGLIDTAVKTSRSGYLQRCLIKGMEGLRAEHDSSVRHTEDGSVIQFLYGE
DGLDIGKAKYLSDFKFTAENYLSLFHTYQMDESKQLLDDEVKDHAKAAEKKFRKTGDLGS
SEPALSLYPPGVHGGSISERVLADAREWLDKDQERLIKDKKKNPNGIVSKKNFNNILDMR
YLKSVVEPGEAVGVVAGQSVGEPSTQMTLNTFHLAGHAAKNVTLGIPRLREIVMTAAANI
STPAMTLVMNPGISVDDAKKFAKGISKLKLSEIVDNVSVTESVGKGVGYGEARKYDVKLD
FFPSDEYQKEYAITIQDVVATIEHRLLPRLQAATRKELKKRGAQKSLKTAAGDDALPEIG
QSAGRVEEERARPEGGREGGEDDSDGEGDDDATRDKSKSNKQQAGYDAYEDDEEQNIRQR
QVTPEPIDGEEDETYGGSPRSSVEPEEDGPGARSEAKDRAARIRGNDKTHDIVAFNFDDK
KGATCSFTMEYDSASAKILMLNIVETALHQALIQSVPGMALCMLDEEGTKEADGKPILAA
SGTNITAMWDYQHIVHPHHIYTNSIHEILIHYGVEAARNAIVKEISGVFGGHGISVDTRH
LTLIADYMTRDGAYQAFSRMGYRNNPSPFMKMSFETTLNFLRDAVLEGDFDDLEGPSARI
VAGRVGKMGTGGFDVLMPLAESQEVEEDEDVEMED
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctcacagcccgtctcctcacagctgcagggcgtcagctttggctgcttgtcg
aaaaaggacataagcgccctgtcagcgaaacgaataacgaatgcgacaaccttcgacact
ctactaaaccctgtgcctggaggtctatacacgtcagaactaggacagtttggcgacaat
ccatgtgggacatgtggcctcaagaatccgcaatgtccaggtcacccgggtcatatcgaa
ctaccagtgccatgctatcacccaacattcatggagcaggtcttgcgactactccgggca
gcatgcatatattgtggcaagttgaaactgaagagagtcttggtcgcgagatacatatgt
aaactaaggcttgtgaggtatggcctgctgaaagagctgactgagcttgacgaggtcgag
tacagaagtgttaagggacagcagactgcagcatctggatccgaggacgacgatgacgac
gagggagatgccgatgtcaaggcgatcacacagcagttcgagcagttcacgaaagactcc
attcggcgggcgaagaaggcaggtacccttggtgaggccaagacggaggtcatcaagaat
gcgaggacagccatcactcgacagttcatggcagatatcgtgaaggggaagaagtgcggg
aactgtggtggcatcaatcacacctatcgaaaggaccgattcgtcaagatcttcaggaag
aagctttcggagaaggaccatgtcgcaatggtgcagcaaggaaagaaggcgaaggatcct
gttgtcgagatgcagaagctcaagcgggcagaaagaagccggaagaggaagcgcgacatg
gatgagggtgtagcagacatggacatcagctcagaagaggaaggcgatgatgtggacatg
gacgaaagctccgaaggtgaacctgagattgctggaggaaacctggttgatgaggcttca
gaagagcgttcttcaagcacaaagacatcgagcaaatcagaccaggactacatcaaccca
agccaagtgaaggcgcatctggaacagctcttcgatcgtgatgccgaaataatgaacttg
gtctatggagtcgacctgaagaagagcactgaacgattatccgccgacatgttcttcctg
gagagcgtgattgtcccaccgaatcgttatcgacccgaagcgaagaccagcagcaccgag
atctctgaggcgcaagagaacgggctgtacaaagatatcatcaccacgagcgaatcgata
acagcgatacagcgagaattgaccacaaaggagccacagaccgtgtcgagatatcgcgcg
agaacatatgctgatcttgaaaacgcatggctgcagctgcaagagaatgtcaacgttgtg
atagatcgaaatctgtcgcccttgcagggacgagctggagctcgaaacgctgatggtgtg
aagcaaaagctggagaagaaagagggcatgttcagaaagtacatgatgggcaagcgtgtg
aactttgctgcgcgtacagtcatttcacccgatccgaacattgaaacgaacgagattggt
gtcccgcctgtctttgctgtcaagcttacctacccggagccggtgaatcagcacaactat
gaggatatgcagcaagctgtcaagaacggacctcatgtttggcctggtgcagtcgcgatc
gaaagcgagactggagctgtgctgaatcttgcgaacaagacggcggacgagcggctagcc
ttggccaactcgttacttgcgccgtctgttggcagcaatgtgcacggagcgagaccaaag
aaggtgcatcgacatctgaacaacggcgacatagtcatcatgaacagacagccgacactg
cataagccgagtatgatgtgtcacaaagcacgagtactacctggggaaaagacgcttcgt
atgcactatgccaactgcaacacgtacaacgccgatttcgatggtgacgagatgaacatg
cactttccacaaaacgagctggcgcgagcagaggccctccttatcgcggacaccgaccat
caatacctttctggaactgctggaaaccctctgcgaggtctcattcaagatcacatctcg
atgtgtgtctggctgacgaatcgagacttgttcttcgagcgaggtgagtacatgaatttg
ctctactcagctctacgccccgaggaccgccataccgaaagcaatcggttggagactgtg
ccgcccgcgataatcaagccgaagcccttgtggactggcaagcaagtcatcagtaccgta
ctcaagaatctgcaaccagcgggaactgctggtttgaacatgactggcaagagtaccact
gccgctacgatgtggggtgagcatggcaaagaagaaggtgtggtcatcttcaaagacggt
gagcttatgcaaggtattcttgacaagaagcagatcggtccagcagctggcggtcttgtc
aatgccgtgtatgaagcatatggctaccgcgctgctggaaggctgttgagtatcctgggc
cgactgttgacaaagcttttgcacatgcgtgccttctcttgcggtgtggaagacttgatc
ttcacacgaaagggagaagaagacagacgagctgccctagctggtgcggattcagttggt
ctgaaggtagctgcaaagtatgtctcgctggaggaccaaaagcccaagagcgacgacaga
gagctacgaaaacgactggaagatgtgcttcgtgatgatgacaagatgcagggcctggat
tcgctcatgaacaacagcacaagggacctcagtggtgacgtctcaaatcgctgcatgcca
gcaggtctgacgaagcccttcccgaagaaccaaatgcagaccatgactacctccggtgca
aagggttccaaggtcaacgtcaatttgatctcatgtaaccttggtcaacaagtcttggaa
ggtcgcagagtacctgtgatggtcagcggtaagacattaccttgcttcaaaccattcgaa
tcgagcgttcgagctggtggctacatcgtggatcgcttcttgactggcattcgaccccaa
gaatacttcttccacgctatggctggtcgtgaaggtcttatcgataccgctgtcaagaca
tctcgttccggatacctgcagagatgtctgatcaagggtatggaaggtcttcgggcggag
cacgattcatctgttcgccacactgaagacggaagtgtcatccagttcttgtacggtgaa
gacggtctggatatcggtaaggcgaagtacctctcggacttcaagttcactgccgagaac
tacctgtccctcttccacacataccagatggacgagtcgaaacagttgctagatgacgaa
gtcaaggaccatgcgaaagccgccgagaaaaagttcaggaagactggtgatctaggttca
agtgagccggctttgtcactataccctccaggtgtgcacggcggcagtatctcggagagg
gtccttgcagacgcgcgagagtggctcgacaaggaccaagaacgcctgatcaaagacaag
aagaagaaccccaatggcatcgtcagcaagaagaacttcaacaacatcttggacatgaga
tacttgaagtctgtcgttgaaccaggtgaagcagttggcgttgtcgctggtcaatctgtc
ggagaaccgtcgacacagatgacgctgaacactttccacttggctggtcacgctgcgaag
aacgttacacttggtattccgcgactgcgagaaatcgtcatgacggcagctgccaacatt
tcgacacctgccatgactctcgtgatgaaccctggcatctctgttgatgatgcgaagaag
tttgccaagggtatcagcaagctgaagctgtccgagattgttgacaatgtctcggtgacg
gagtcggtaggcaagggtgttggatacggggaggcgaggaagtacgacgttaagctcgac
ttcttcccaagcgatgagtaccagaaagagtacgcgatcacgatacaagacgttgtcgcg
accatcgagcacagactgctgccaagactgcaagctgcgacgagaaaggagctaaagaag
cgaggtgcccaaaagtctctgaagacagctgctggcgatgatgcgctacctgagatcggc
cagtcagcaggcagagtagaggaagagcgagctcgaccagaaggtggacgtgaaggcggt
gaagacgactcagatggcgagggcgacgatgatgcgacgcgcgacaagtcgaagagcaac
aagcaacaagcgggctacgatgcctacgaagacgacgaagaacagaacatcagacaacgc
caggtaactcccgagcctatcgacggcgaggaagacgagacatacggcggctcaccacgg
tcgtccgtcgagcccgaggaagatggccccggcgcacgctccgaagcaaaagaccgcgca
gcccgcatcagaggcaacgacaagacccacgacatcgtggccttcaacttcgacgacaaa
aaaggcgcaacctgttccttcaccatggagtacgactccgcctccgccaagatcctcatg
ctcaacatcgtcgaaaccgcgctccaccaagccctcatccaatccgtccccggcatggcc
ctctgcatgctcgacgaagaaggcaccaaagaagccgacggcaaacccatcctcgccgcc
tcagggaccaacatcacagccatgtgggactaccaacacattgtccacccacaccacatc
tacaccaactccattcacgagatcctgatccactacggcgtcgaagcggcgcgcaacgcg
atcgttaaagagatctcgggggtgtttggtggtcacggtatttctgttgatacgaggcat
ttgacgctcattgcggattatatgacgagggatggagcgtatcaggctttttcacgaatg
ggataccgtaacaacccaagtccgttcatgaagatgagtttcgagactacactgaatttc
ctgagggatgcggtgttggagggcgactttgatgatcttgaggggcctagcgcgaggatt
gtggcgggacgagttgggaagatgggaaccggtggatttgatgtgcttatgccgttggcg
gagagccaggaagttgaggaagatgaggatgttgagatggaggactag
DBGET
integrated database retrieval system
