Fulvia fulva: CLAFUR5_09807
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Entry
CLAFUR5_09807 CDS
T08195
Name
(RefSeq) Replication factor A protein 1
KO
K07466
replication factor A1
Organism
ffu
Fulvia fulva
Pathway
ffu03030
DNA replication
ffu03420
Nucleotide excision repair
ffu03430
Mismatch repair
ffu03440
Homologous recombination
ffu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLAFUR5_09807
03420 Nucleotide excision repair
CLAFUR5_09807
03430 Mismatch repair
CLAFUR5_09807
03440 Homologous recombination
CLAFUR5_09807
03460 Fanconi anemia pathway
CLAFUR5_09807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ffu03000
]
CLAFUR5_09807
03032 DNA replication proteins [BR:
ffu03032
]
CLAFUR5_09807
03400 DNA repair and recombination proteins [BR:
ffu03400
]
CLAFUR5_09807
Transcription factors [BR:
ffu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
CLAFUR5_09807
DNA replication proteins [BR:
ffu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
CLAFUR5_09807
DNA repair and recombination proteins [BR:
ffu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
CLAFUR5_09807
MMR (mismatch excision repair)
CLAFUR5_09807
DSBR (double strand breaks repair)
HR (homologous recombination)
CLAFUR5_09807
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF8448
DUF4503
Motif
Other DBs
NCBI-GeneID:
71989685
NCBI-ProteinID:
XP_047766100
UniProt:
A0A9Q8PFN7
LinkDB
All DBs
Position
9:join(4044323..4044509,4044562..4046122,4046182..4046296)
Genome browser
AA seq
620 aa
AA seq
DB search
MADALSIISQGALRRIAEGEQVEQPVFQCVQIKPMAQANGGQERWRVVFNDTINFIQGMI
AIQSNHLISEGKLKKGSICRLNNYQANYVKDKYILIIIGLDVLEEYGEQDKLGQPVALDN
AKPEAQEDVKPQPGNIAGNNFYGNKPQQQAPQQQQRALPSRTNGASHGGHANITPIEAIS
PYTHKWTIKARCTNKSDIKTWHNKNGEGKLFSANFLDDSGEIRMTGFNDAVDQWYDTLQE
GGVYYISSPCRVQLAKKQFSNLNNDYELTAEKDTQIEKAEDNDGVPQVRYNFTTIAALQE
IEKDSTIDVIGVLQDVGEVSEIVSKTTSKPYSKRELTLVDNTGYNVRLTVWGKTAETLDV
QPESVVAFKGVKVSDFGGRSLSLLSSGSMTANPDIEEAYKLKGWYDGTGRTENFASHANT
MATVGATSGAKGNDTKTIAQVRDENLGMTEDTDWFSIKATIIYVKQDNFAYPACRTTDPQ
PCNKKVLENDPGNWRCEKCDKSWDAPKYRYIMSVNVSDHTGQIWLSCFDEVGERMMGMPA
NDLMAMKEEGDDKRVADAFGDANCQTFNFHVRAKMDNFQDQQRVRYQVQYANPLDFSREA
TKLAQIIKQYNMNDDSLFVQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcactcagtatcatctcgcagggcgcgctgcgtcgcatcgccgaaggcgag
caggtcgagcagcccgtcttccagtgcgtgcagatcaagcccatggcacaggcgaacgga
gggcaagagcggtggcgtgtcgtcttcaacgataccatcaacttcatacagggcatgatc
gccatacaatccaaccacctcatcagcgaaggcaaactgaagaagggcagcatatgccgc
ctgaacaactaccaagcgaactacgtcaaagacaagtacatcctgatcatcatcggcttg
gatgtactggaggagtacggcgagcaggacaagctgggtcagccagtggcactggacaac
gcgaagccggaggcgcaggaggatgtcaagccacagccaggaaatatcgcaggcaacaac
ttctacggcaacaagccacagcagcaggcaccacaacagcaacagcgagcacttccgtcc
cgcacgaatggagcgtcacatggcggccatgcgaacatcacacccatcgaagccatctcc
ccatacacgcacaagtggactatcaaggcccgctgcacaaacaaaagtgacatcaagacc
tggcacaacaagaatggcgaaggcaagctcttcagtgcgaacttccttgacgactctggc
gagattcgcatgaccggcttcaacgatgctgtggatcagtggtacgacacactccaggag
ggcggcgtctactacatttcgagcccatgcagggtgcagctagccaagaagcaattctcg
aacctcaacaacgactacgagctcaccgccgagaaagatacgcaaatcgagaaggccgag
gacaacgatggagtgccgcaagtgcgttataacttcaccactattgcggcgctgcaagag
attgagaaggactctacaatcgatgtcatcggtgtgctgcaagatgtgggtgaggtgtcg
gagatagtctcgaagaccacatccaagccatacagcaagcgtgagctgaccttggtcgat
aacaccggctataacgttcggcttactgtctggggcaagactgcggagactcttgacgta
cagccagagtctgtggtggcattcaagggtgtcaaggtcagcgactttggtggacgttct
ctgtccctgctctccagcggcagcatgaccgccaacccagacatcgaggaagcatacaag
ctcaaaggctggtatgacggtaccggtcgcaccgagaacttcgcctcgcacgcaaacact
atggccacagtcggcgcgacgtccggtgccaagggcaatgacacaaagaccatcgcacaa
gtacgagacgagaatctcggcatgactgaagacacagactggttcagcatcaaggcaacc
atcatctacgttaaacaggacaactttgcctacccagcttgtcgcaccacagaccctcag
ccttgcaacaagaaggtgcttgagaacgatcctggcaactggcgatgcgagaagtgcgac
aagtcgtgggacgcgccgaagtatcgatacatcatgtctgtcaatgtcagcgaccacaca
ggccagatatggctgagctgcttcgatgaggttggcgagcgtatgatgggtatgcccgca
aacgacctcatggcaatgaaggaagaaggcgacgacaagcgtgtggcagacgcctttggt
gacgcgaactgtcagactttcaacttccacgtaagagcgaagatggacaatttccaggat
cagcagagagtccgctatcaggtacaatacgccaacccactcgacttctcacgtgaagcg
accaagctggctcagatcatcaagcagtacaacatgaatgatgacagtttgttcgtccag
tag
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integrated database retrieval system
