Fulvia fulva: CLAFUR5_09983
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Entry
CLAFUR5_09983 CDS
T08195
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ffu
Fulvia fulva
Pathway
ffu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLAFUR5_09983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffu03041
]
CLAFUR5_09983
03009 Ribosome biogenesis [BR:
ffu03009
]
CLAFUR5_09983
Enzymes [BR:
ffu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLAFUR5_09983
Spliceosome [BR:
ffu03041
]
Complex A
U1 snRNP components
U1 related factors
CLAFUR5_09983
Complex B
CLAFUR5_09983
Ribosome biogenesis [BR:
ffu03009
]
Eukaryotic type
Pre-60S particles
Helicases
CLAFUR5_09983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF5817
Motif
Other DBs
NCBI-GeneID:
71989861
NCBI-ProteinID:
XP_047764859
LinkDB
All DBs
Position
7:complement(join(621816..622030,622085..622213,622723..623966,624075..624238))
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AA seq
583 aa
AA seq
DB search
MSYGGGGYGGRGGGGGGGGYGGGGGYGGSNGYDSNYGGYDYGSRGGYDDRSYSNGYSNGG
SNGYGGGGGGYSNGGGYGGGGGGYGGGGGGYGGGGDKMSQLGAGLKQQNWDMDTLPKFEK
SFYKEAPTVAARTPAEVDEFRRVNQITIQGRDVPKPVETFDEAGFPNYVMSEVKAQGFPK
PTAIQSQGWPMALSGRDVVGVAETGSGKTLTYTLPAIVHINAQPLLAQGDGPIVLILAPT
RELAVQIQEEVSKFGKSSRIRNTCVYGGVPKGGQIRDLARGVEVCIATPGRLIDMLESGK
TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQLASDYQNN
FIQVNIGSHDLAANHRITQIVEVVSDFEKRDKMIKHLEKIMEDKANKILIFTGTKRIADD
ITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVKDITHVFNY
DYPNNSEDYVHRIGRTGRAGRLGTAITLFTTDNSKQARELVGILSEAKQNVDPRLAEMAR
YGGGGGGGGRGWGGGRGRGGGRGGRGGWTGSNNAPLGGERQRW
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggcggtggtggctacggaggtcgcggcggcggcggcggaggtggcggatac
ggcggcggaggaggctacggcggctccaacgggtatgactcgaattatggaggctacgac
tacggctctcgcggcggctatgatgatcgatcctactcgaatggatacagcaacggcggt
tcaaacggctacggcggaggcggtggtggctactccaacggcggtggctacggaggaggt
ggaggtggttacggcggcggtggaggtggctacggtggtggcggtgacaaaatgtctcaa
cttggtgctggtctcaagcagcagaactgggacatggatacacttccaaagtttgagaag
tccttctacaaggaggctccaacagttgccgctcgcacaccagccgaggtcgacgagttc
cgtcgcgtcaaccagatcacaatccaaggtcgcgatgtgccgaagccagtcgagaccttc
gacgaggctggtttcccgaactatgtcatgagcgaggtcaaggcacaaggcttccccaag
ccaactgccatccaatcgcaaggttggcccatggccctctcaggtcgcgacgttgtcggt
gtcgcagagactggttccggaaagacgctcacctacacgcttcccgccatcgtccacatc
aatgcacagccgctcctcgcacagggcgacggtccaatcgtcctcattctcgctcccacc
cgtgagctcgcagtccagattcaagaggaagtcagcaagttcggaaagtcatctcggata
cgaaacacctgtgtgtacggtggtgtgcccaagggtggacagatcagagacctcgctagg
ggcgtggaagtctgcatcgccactcccggccgtctcatcgacatgctcgagtctggcaag
accaacttgcgccgtgtgacttacctcgttctcgacgaggctgatcgcatgttggacatg
ggtttcgagccacagatccgcaagatcatcggtcagattcgcccagatcgtcagacatgc
atgtggtctgcaacttggccaaaggaagtccgccagctcgcttccgactaccagaacaac
ttcatccaggtcaacatcggttcgcacgacctggccgctaaccaccgtatcacccagatc
gtcgaggtcgtctccgacttcgagaagcgcgacaagatgatcaagcacctcgagaagatt
atggaggacaaggctaacaagatcctcatcttcaccggcaccaagcgcattgccgacgac
atcacccgcttccttcgtcaggacggctggccggccctttccattcacggtgacaagcag
cagaacgagcgtgactgggtgctcaacgagttcaagaccggaaagagccccatcatggtt
gccaccgacgtggcttcgcgtggtatcgacgtcaaggacatcactcatgtcttcaactac
gactacccaaacaactcagaggactacgtgcaccgtatcggtcgtactggtcgtgctggc
cgcttgggtaccgccattaccctcttcaccactgacaactccaagcaggcacgcgagctc
gttggcatcctgagcgaagccaagcagaacgtcgacccacgccttgccgagatggctcgc
tacggtggcggcggaggtggcggtggccgcggctggggtggaggtcgtggtcgaggtgga
ggccgtggaggccgtggcggatggaccggctcgaataacgctcctctcggtggcgaacgt
cagcgctggtag
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