KEGG   Fulvia fulva: CLAFUR5_10088
Entry
CLAFUR5_10088     CDS       T08195                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC5
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
ffu  Fulvia fulva
Pathway
ffu03020  RNA polymerase
ffu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ffu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CLAFUR5_10088
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLAFUR5_10088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ffu03021]
    CLAFUR5_10088
   03400 DNA repair and recombination proteins [BR:ffu03400]
    CLAFUR5_10088
Transcription machinery [BR:ffu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CLAFUR5_10088
  RNA polymerase III system
   RNA polymerase III
     CLAFUR5_10088
  RNA polymerase I system
   RNA polymerase I
     CLAFUR5_10088
DNA repair and recombination proteins [BR:ffu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CLAFUR5_10088
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-GeneID: 71989966
NCBI-ProteinID: XP_047764302
UniProt: A0A9Q8PCJ8
LinkDB
Position
7:join(991884..991919,991975..992051,992112..992244)
AA seq 81 aa
MIIPIRCFSCGKVIADLYERYVELIGTPQDNGDTMSDGDAMDQLGLNRYCCRRMMLTHVD
LIEKLLRYNPAERDIIKQGNR
NT seq 246 nt   +upstreamnt  +downstreamnt
atgattatcccaatccgctgcttctcgtgtggaaaggtcatcgcagacctctacgaacgc
tacgtcgaactgatcggcacaccgcaagacaacggcgacaccatgtcagatggcgacgct
atggatcaactcggcctgaaccgctactgctgccgccgcatgatgctcacgcacgtcgac
ctcatcgagaagctcctgcgatacaacccagcggagcgcgatatcatcaaacagggaaac
aggtga

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