Fulvia fulva: CLAFUR5_10398
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Entry
CLAFUR5_10398 CDS
T08195
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
ffu
Fulvia fulva
Pathway
ffu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CLAFUR5_10398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ffu03009
]
CLAFUR5_10398
Ribosome biogenesis [BR:
ffu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CLAFUR5_10398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Utp21
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
ANAPC4_WD40
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Tricorn_2nd
Beta-prop_EML
Utp12
Motif
Other DBs
NCBI-GeneID:
71990276
NCBI-ProteinID:
XP_047764838
UniProt:
A0A9Q8US74
LinkDB
All DBs
Position
7:2923243..2926365
Genome browser
AA seq
1040 aa
AA seq
DB search
MEIDGADGRIAKRQKLSNGIAKQRRQPGQSRVFAPYRTVGLVSPTAVPFTSVPLGKTTFQ
ITTSVGRSLQTYDLRRGLQLVFITRPQTPEAITATTAWKDKVFAAWGGESQDAQRGVWVF
KRGKKEAELEMPSDRDENVKAFCIFGGWVVGVCETQLLVWKSATWELYTTLRGISPVPLT
QCISSLPTFLNKVIVGRQDGSAEIWNVSSGKLVYTILPPSTAYGAVTAIEPTPALSLVAI
AFEKGPLLVQDVRTDQTVMQLSTPTGAPIASISFRTDGLGAGEDGRSSGVMATASTASGD
VTLWDLNNGGRKAGVLRAAHAQPTPTTPGGTSKVEFLSGQGILVSSGLDNSLKTWIFDDT
PFSPIPRILHERRGHGAPVSKLMFLPTASDGSDDTGKWLLSSSKDRSLWGWSLRRDGQST
EISQGAVQKRAKKQGLLSGNRDFEDLKCPPITSMACCLNRDGGMGAIPGKHPIWQPAGKG
KQLSAEISAMTGWESVLTAHESDNKARTWFWGRKRAGRWAFQTGDGSNVTSVTVSPCGTF
GVVGSEKGGIDMFNMQSGIQRQRYPARLTPMQAKQLRLDVQGHGLVEEDDGKKKFYRGQG
KHGAAVVGLAVDSLNKTIVSAGADGKVKFWDFNSGLLRHQIDWSSSTSITAMRFHRSSDL
AALSCADNCIRVIDIATQKLIRELWPSRSHVPQLHKLKISDFTFSDDGRWIAASAGQVVF
LWDLPTGHLVDAFKLKAECTSLAFSPTGDFLATATQDNVGVDIWTNRSLFTHIPTRHIGL
KELTAILSSTDVQAPTASGEGGANLVADAADSAFDDEAEADILDIADDEVDQISSDLLSL
SIVPRSRWQNLMHLDLIRQRNKPIEPPKKPEKAPFFLPSLQDRQGPQPIDPQAGASAAAD
IEKERTRVLQLDREGMRSGFTSLLHASAETEDYDPFLEHLKNLSPAAADIEIRSLSYENE
EFVGFVRALTWRLQQKRDFELCQAWMAVFLKVHGDVVVGDEEVRGAVQEYRDALEVEKRR
VQKLSGYVSGLVGYLRAARV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggagattgatggcgcagacgggcgcatcgcaaagcggcagaagctgtcgaacggcata
gcgaagcagcgacggcagcctggccagtcgcgcgtgtttgcgccgtatcgcactgtaggc
ctggtctctcccacggcagtgccattcaccagcgtgccactcggcaagacgacgttccag
atcacgacatctgttgggcgcagtctgcagacatacgatctgcgacgtggcctacaacta
gtcttcatcacccgaccgcagacgccggaggccatcaccgcaacgacagcgtggaaggac
aaagtcttcgcagcatggggaggcgaatcgcaggatgcgcaacgaggcgtgtgggtattc
aagagaggcaagaaagaggccgagctggagatgccatcagatcgcgatgagaatgtgaag
gcgttctgcatctttggcggctgggtcgttggcgtctgtgaaacacagctcttggtgtgg
aagagcgcgacctgggaactatacacgactctacgcggcatctcgcctgtgcccctcaca
caatgcatctccagcctgccgaccttcctcaacaaggtcattgtgggcagacaagatggc
agtgccgagatctggaacgtttcgagcggcaagctggtctacaccatactgcctccatca
acagcatatggtgccgttacggccatcgaacccactcctgcgctatcattagtcgccatt
gctttcgagaagggtccattactggtgcaagatgtccggaccgatcagactgtcatgcag
ctcagcacgccgactggagcccccattgcgtccatctcgttccgcacggatggtctcggt
gcaggcgaggatgggcgatcgtccggtgtcatggcgactgcatctactgctagtggcgac
gtgactctctgggacttgaacaacggtggtcgcaaagctggtgtccttcgagctgctcat
gctcagccaacgccaacgactccaggcggcaccagtaaagtggagttcctgtcagggcag
ggcatcttggtcagtagcggcctggacaacagtctcaagacctggatattcgacgacaca
cccttcagcccgattccgcggatactgcatgagcgacgtggtcatggtgcacctgtgtcg
aagctcatgttcttgcctacagcatcggatggctcagatgacactggcaagtggctctta
tcgagtagcaaggatcgaagcttgtggggctggtccttacgaagagatggacagagcacg
gagatcagtcaaggtgctgtgcagaagagggcaaaaaagcagggtctgctttctggcaac
cgcgacttcgaagatttgaagtgccctcctatcacaagtatggcatgctgtttgaacaga
gacggaggcatgggtgctattcctggcaaacatcctatctggcaacctgcaggcaaagga
aagcagttgagcgccgagatcagcgccatgactggttgggaaagtgtgctgactgcacac
gagagcgacaacaaagctcgcacctggttctggggtcgaaagcgagctggacgatgggcc
ttccagactggggacggtagcaacgtcacctcagtaaccgtgtcaccgtgtggcactttt
ggtgtcgttggatcagagaagggcggtattgacatgttcaatatgcagtctggcatccag
cggcagcgttatccagcaagactcacacctatgcaagcaaagcaactgcggctggatgtg
caaggacacggactggttgaggaagacgatgggaagaagaagttctaccgtggccaaggc
aagcatggcgctgctgtcgtcggacttgccgtggacagcttgaacaaaacgattgtgtct
gctggcgctgatggcaaagtgaagttctgggacttcaacagtgggctattgcgacaccag
attgactggtcaagcagtacgagcattactgctatgcgcttccaccgaagctctgatctg
gctgctctttcctgcgcagataactgcattcgagtcattgacatcgcaacgcaaaagctg
atccgtgaattatggccttccaggtcgcacgtaccacagttacacaagctgaagatatca
gacttcaccttctcggatgatggccgctggattgccgcatctgctggacaggttgtattc
ttgtgggatctgcctactggtcacctggtggatgccttcaagctcaaagctgaatgcaca
agtcttgctttctccccgactggcgattttctggctacggcgacacaagacaatgttggc
gtggacatctggacgaatcgaagtttgttcacgcacattcccacgcgacacatcggtcta
aaggagctcacagcaatactcagctcaacagacgtacaggcaccaacagcctccggtgag
ggcggcgccaacctcgtcgctgacgccgcagattctgctttcgacgacgaagcagaagca
gacatcctcgacatcgcagacgatgaagtcgatcagatctcctcagacctcctttccctc
tccatagtcccacgatctcgctggcagaatctgatgcacctggacctcatccgtcaacgc
aacaagcccatcgaaccacctaagaagcccgagaaagcccccttcttcctcccatcgtta
caagaccgccaaggcccacaaccgatagatccacaggctggtgcttccgccgcagcagat
atcgagaaggaacgcacccgcgtcctgcaactcgatcgcgagggtatgcgaagcggattc
acatctcttctccacgcctccgcagagacagaagattacgaccctttcctcgagcatctc
aagaatctcagtccggcagctgcagatatcgagattcgatctttgagctacgagaatgaa
gagtttgtcggcttcgtccgcgctttgacgtggaggctgcagcaaaagcgggactttgag
ctttgccaggcctggatggcggtgttcttgaaggtgcatggcgatgttgtggtgggtgat
gaggaggtcaggggtgctgtgcaggaatatagagatgcgctggaggtagagaagaggagg
gtgcagaagttgagtgggtatgttagtgggcttgtgggatatttgagggcagcgagggtg
tag
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integrated database retrieval system
