Fulvia fulva: CLAFUR5_11527
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Entry
CLAFUR5_11527 CDS
T08195
Name
(RefSeq) General transcription and DNA repair factor IIH subunit tfb4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ffu
Fulvia fulva
Pathway
ffu03022
Basal transcription factors
ffu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLAFUR5_11527
09124 Replication and repair
03420 Nucleotide excision repair
CLAFUR5_11527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffu03021
]
CLAFUR5_11527
03400 DNA repair and recombination proteins [BR:
ffu03400
]
CLAFUR5_11527
Transcription machinery [BR:
ffu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CLAFUR5_11527
DNA repair and recombination proteins [BR:
ffu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CLAFUR5_11527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
71991405
NCBI-ProteinID:
XP_047765235
UniProt:
A0A9Q8PEA6
LinkDB
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Position
8:complement(3566324..3567466)
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AA seq
380 aa
AA seq
DB search
MNAVDATERSDKHDETEPPSLLTIILDTNPHAWALHETSLSLSKAVANLLVFINAHLAIN
HGNKVAVLASHAERAEFLYPAPARVKQHPTAATGNVDTGNDDLIGSGGPVQPPDDANKYR
PFAHIEHALTSNLREMMNRTSPTSLSAPSTMLAGALTMALTYISKQSASLPTANSSAQFN
YSDPSSVAGGTDLTADGRKKKHHGLRSRILILSVSGDLADQYISIMNAMFACQRMSVPID
ILKLAGDTVFLQQAADATGGVYVALDDKTRAGFLQYLMFAYLPDQTARAHLIMPGEGEGV
DFRAACFCHRKVVDTGYVCSICLSIFCEPLHDGTCLTCGSHLTMSNYGQNPVVVPKKKKK
KKRPLDGATPDSRAGTPLPS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtcgacgccacagagcgaagcgacaaacacgacgaaacagagccgccatca
ctactgaccatcatccttgacaccaatccgcatgcctgggcattacacgagacatcattg
tcattgtcaaaggcagtcgcgaatctgctggtcttcatcaatgcacatctcgccatcaac
cacgggaacaaggtcgcagtgctcgccagccacgcggagcgcgctgagttcttgtatccc
gccccagcgagagtgaagcaacacccaacagccgccactggcaatgtcgacacgggcaat
gatgacttgatcggcagcggaggcccagtccagccaccagacgatgccaacaagtacaga
ccctttgcgcatatagagcatgccttgaccagcaatctgcgggagatgatgaacagaaca
tctcccacttcgctctctgcaccaagcacgatgctagccggggcgttgacgatggccctt
acatacatatcaaagcaatctgcttcgctaccaaccgcaaactccagcgctcaattcaat
tactctgacccgtcctctgtcgcaggtggcaccgacttgactgccgacggcaggaaaaag
aaacatcatggattgaggtcaaggatcctgattttgtctgtgtcaggcgacttggcagac
cagtatatcagcatcatgaacgccatgtttgcgtgtcaacgtatgagcgtaccgatcgac
atcttgaaactcgccggcgatactgttttcctccagcaggcagcagatgctacgggcggg
gtctatgtcgcgctcgatgacaagactcgagccgggtttctgcagtatctgatgtttgcc
tatctaccagatcagactgcacgagcccacttgattatgcctggcgaaggtgaaggagtc
gactttcgagcagcctgcttctgtcatcgcaaggtcgtcgacacgggctacgtctgctca
atttgcttgagcatattctgcgaacctttgcacgatggcacatgcctcacttgtgggagt
catcttaccatgagcaactacggccagaatccagtggtggtgcccaagaagaagaaaaag
aagaagcgaccacttgacggagcgacaccagatagtcgagctggcacgccacttccatcc
tga
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