Fulvia fulva: CLAFUR5_11557
Help
Entry
CLAFUR5_11557 CDS
T08195
Name
(RefSeq) DNA topoisomerase 2-associated protein pat1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ffu
Fulvia fulva
Pathway
ffu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLAFUR5_11557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_11557
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CLAFUR5_11557
mRNA degradation factors
5'-3' decay
Decapping complex
CLAFUR5_11557
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
71991435
NCBI-ProteinID:
XP_047765766
UniProt:
A0A9Q8UT43
LinkDB
All DBs
Position
8:complement(join(3686828..3687536,3687584..3689325))
Genome browser
AA seq
816 aa
AA seq
DB search
MSFFGFDTNLPGDRRGGQGMFDRQDPFGGLGDGGDQEALDFDQTYDGLGQHLQETGDEDN
DDTFGGDMPVTRDQLGKDFDFAGQTANIRDTLLEEQVLHQARQPMQQARAPKPARTGYEA
YKQPDYMPKLEADASIWGTSVTKKQAPQVQQEQPLAGSAPKMMSLEEVEAMMRANARPTP
LAQQPAPDVHAQTLGLKNMLGLGGPPSGAPTPPAQQPQPAFEQQQQRPPQILQRPQPPQE
NQQPQPDYNLRAPQILQRQHSPANARPQSQDFNGQPQFQHGPPPGMPRVGGHTVPPHVRH
QQQNHQQHGHNRGPSYSGPPITQAQQLMQMAPEEREAYLAEEAKRAKRNHKIFLLSKNNG
LMTPQDKNFITRIQLQQLLTATGGIDNEQGSEEQLAEDFYYQVYASIRGPPRSGPGQPLN
QFAQTYLFQTGSRYGYGRSRHHPRGGDNHVQRMEQQVARAVEAAKARPKNKQLVMEGSLG
KIAFSNSKTPRPLLNIKRPDSAHPQMRPPKPADRKTALRNIESLYSTLMRLEDHERKLPP
PPNEDSPPDVIEDHMRWRSEMQELNQQLWETLKVMEPIQPNPTTPHPFIQLLSHSKGKKA
IPRIFRHLDDNQRLTMLTLIAIHLDILDVIRDAYPPADNSPVPPRVKEEVFTFEQAVLPP
LYSYISEAPLNIIIGLVGLVLDRVHLQAIVRTKIGVLILTAFINRAELVTQQQGPSDDWS
SHYGRLFDTIEPVLPYMFPTETNLAASDDVHIWHFLATVGVGASPDQQQRLVLGVKDRVM
ETVAVSKTLPEEMSQKRLGDVNLFMRAIGLDVELLG
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcttcggcttcgacacgaacctgcctggggacaggcgaggcggacagggcatg
ttcgatcggcaagatccttttggtggacttggagatggcggtgatcaagaggcgctggac
tttgaccagacgtatgatggtttaggacagcatctacaagagacgggcgatgaagacaac
gacgatacctttggcggcgatatgcccgtaacgcgcgatcagcttggaaaagacttcgac
ttcgctggccagactgccaacatccgcgatactctgcttgaggagcaagtgcttcaccag
gcacgccagccaatgcagcaggcccgcgcgccaaagcctgcaaggactggatatgaggca
tacaagcagccagactacatgcccaagctggaagcagacgcctcaatctggggcacatca
gtcacgaagaagcaggcacctcaagtacagcaggagcagccgctggcgggaagtgcccca
aagatgatgagcttggaggaggttgaggccatgatgcgtgccaatgcgagacccactcca
ctggctcagcagcccgctcctgatgtgcatgctcagactttgggcttgaagaacatgctt
ggacttggtggtcctccgagcggtgcaccaactccgccagctcaacagccacagccagcc
ttcgagcagcagcaacaaagaccgccgcagatcttgcaacgcccgcaacctccacaggaa
aatcagcagccacagccagattacaacctccgagcaccacagatcctgcagagacaacac
tctcctgctaatgcgagaccccagtcgcaggactttaacggtcagccacagttccagcac
ggccctcctccaggtatgcctagggttggtggtcacactgtgcctccacatgtccggcat
caacagcagaaccatcagcagcatggtcataatcgtggcccatcgtatagcggcccgcct
ataacacaggcgcagcaactgatgcagatggcacccgaagagcgtgaagcatacctcgcg
gaggaagcaaagcgtgctaagcgaaaccacaagatcttccttctcagcaagaacaacggc
ctcatgacacctcaggacaagaacttcatcactcgcatccagctacagcaactgcttaca
gccactggcggcattgacaacgagcaaggcagtgaggagcagctagcagaggacttctac
taccaagtatatgcatcaatcagaggtccaccacgcagtggccctggtcagccactcaat
cagttcgctcagacttatcttttccaaactggcagtcgctacggctatggacgaagtagg
catcatccacgcggtggcgataatcacgtgcaaagaatggagcagcaggtcgccagagct
gttgaggcagcgaaggctagaccgaagaataagcagctggtgatggagggaagccttgga
aagatcgcctttagtaactctaagacgccccgaccacttcttaacatcaagcggccagac
tcagcacatcctcagatgagaccaccaaagccagcagaccgcaagaccgctctaaggaac
attgagagcctttactcgaccttgatgagactcgaagaccacgaacgcaagcttccaccg
ccacccaacgaggatagcccgccagatgtgatagaagaccacatgagatggcgcagtgag
atgcaggagctcaaccagcagttgtgggagacactaaaggtcatggagcctatacagccc
aacccaacaacaccacacccctttatccagctcctctcccacagcaaaggaaaaaaggcg
atccctcgcatcttccgtcacctcgacgacaatcaacgcctgacaatgctcaccctcatc
gccatccaccttgacatccttgatgtaatccgcgacgcctatccgcccgccgataacagc
cccgtcccaccccgcgtcaaagaagaagtcttcacattcgaacaagcagtccttccacca
ctgtacagctacatcagcgaagcacctctgaacatcatcatcggtctcgtcggccttgtc
ctagaccgcgtacacctccaagccatcgtgcggacgaagattggtgtgttgatcctcacg
gcattcatcaaccgcgccgagcttgtgacacaacagcaaggacctagcgacgactggagc
agccattacggtagactcttcgatacgattgagccagtgctgccgtacatgttcccgaca
gaaacgaatctcgccgcatcagatgatgtgcacatctggcactttttggcaacggtgggc
gttggtgctagcccagatcagcagcagagactggtgttgggtgtgaaggatcgggtcatg
gagacggtggcggtgagcaagacgttgccggaggagatgagtcagaagaggctaggggat
gtgaacttgttcatgagagcgattgggttggatgttgagttgcttggttga
DBGET
integrated database retrieval system
