Fulvia fulva: CLAFUR5_11724
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Entry
CLAFUR5_11724 CDS
T08195
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ffu
Fulvia fulva
Pathway
ffu03020
RNA polymerase
ffu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLAFUR5_11724
09124 Replication and repair
03420 Nucleotide excision repair
CLAFUR5_11724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffu03021
]
CLAFUR5_11724
03400 DNA repair and recombination proteins [BR:
ffu03400
]
CLAFUR5_11724
Enzymes [BR:
ffu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLAFUR5_11724
Transcription machinery [BR:
ffu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CLAFUR5_11724
DNA repair and recombination proteins [BR:
ffu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CLAFUR5_11724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-GeneID:
71991602
NCBI-ProteinID:
XP_047767434
LinkDB
All DBs
Position
10:complement(135702..139475)
Genome browser
AA seq
1257 aa
AA seq
DB search
MAYNGDAMMAQMDGGEDDIDVNMITAEDCWTVIHSFFDAKGLVSQQLDSFDEFASTTMQE
IVTETPPIIIDQNIAAEDEESNQPIIKRRVELHLEDVAISQAAMTEGDGSTRALFPHEAR
LRNLTYASPMFLSITKRQKLCRERSVGGWLDDTGYWNDPPDHDGQTELHWDDDPDNPPET
QKEIFIGKLPIMLKSKICTLRNRSEQELYAFQECPFDQGGYFIINGSEKVLIAQERSAAN
IVQVFKKKGTNTPVVAEIRSAIEKGTRLISSMQLKLYKQSANSNAHGETIKVSVPYIKSD
IPIAIVFRALGVVSDEDILNHICNKSDTKMLEMLKPCLEEAFVIQDRDSALDHIGRRGQQ
QGTKDRRIRYAKDIMQKEFLPHISQEEGSETKKAFFLGYMVNRLLQCHLGRTDEDDRDHF
GKKRLDLAGPLMAQVFRLKFQQLVKDMKAYLHRCVETGREFNITLAVKTNILTSGLRYCL
ATGNWGDQKKAASAKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGL
VCPAETPEGQACGLVKNLSLMCYVTVGTPAEPLVDFMRQRGMDLLEEYDPVLNPKATKVF
LNGTWIGVHKNANDLTNMMRSLRRKGVLSFEVTIIRDVREREIKIFTDAGRVCRPLFVVE
NDPKNPNNGSLVLQREHCQRLADDQNVLAELAGVSEEEREQKVFGWKGLVDAGVVEYLDA
EEEETAMIIMTPEDLEEHKLMRQGVPMEDTRADPHRRIKSKPNPYVRTWTHCEIHPAMIL
GICASIIPFPDHNQSPRNTYQSAMGKQAMGVTLTNYNTRMDTMANVLYYPQKPLATTRSM
EYLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGLFRSLFFRSYTDQEKRVGMS
VVEAFEKPIRSDTMRMKQGTYDKLDEDGIITPGSRVSGEDILIGKTAPMPPDAEELGQRT
SLHIKRDVSTPLRSTENGVIDQVLLTTNTEGLRFVKVRTRVTKVPQIGDKFASRHGQKGT
VGITYRQEDMPFTADGLTPDIIINPHAIPSRMTIAHLIECLLSKVGALNGQEGDATPFTD
VTVTSVSDILASHGFQQRGFEVMYNGHTGKKLNAQVFLGPTYYQRLRHMVDDKIHARARG
PLQILTRQPVEGRARDGGLRFGEMERDCMIAHGASAFLKERLLDVSDAFRVHICEICGLM
TPVASLKKQQFECRPCKNKTKIAQIIIPYAAKLLFQELAAMNVATRMFTTRSGISIR
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcatacaacggggacgccatgatggcgcagatggacggcggagaggacgacatcgat
gtgaacatgatcaccgccgaggactgctggactgtcatccactctttcttcgacgccaag
ggcctggtatcgcaacagctcgactcgttcgacgagtttgcgagtaccacgatgcaagag
attgtcaccgagacgccgcccatcatcatagaccaaaacatcgccgcagaggacgaggag
tcgaaccagccgatcatcaaaagacgcgtcgagctgcatcttgaggatgtcgccataagt
caagcagccatgacagaaggcgacggcagtactcgagcattgttccctcacgaagcgcgg
ctccggaacctaacatatgcttcacccatgtttctgtcaatcacaaagaggcaaaagctt
tgtcgagagcgatctgtgggtgggtggctggatgatacaggctactggaatgacccgccg
gaccacgacgggcagacagagttgcactgggatgatgacccagacaacccgccggagaca
cagaaagagatctttatcgggaagctacccatcatgttgaaatccaagatctgtactttg
cggaaccgtagcgagcaagagctgtatgcattccaggaatgccctttcgaccaaggaggt
tatttcatcatcaacggcagtgagaaagtcctcattgcgcaagagcggagtgctgcaaac
attgtgcaggtattcaagaagaagggtacaaacacacctgtggtggccgagatcagaagt
gcaattgaaaaaggtacacgcttgatcagttcgatgcagcttaagctctacaagcagtcc
gccaactcgaacgcacacggcgagacaatcaaggtgtcggtgccatacataaagagtgac
attccaattgcgatcgtctttcgggcgctcggcgttgtctccgacgaggatatcctgaat
cacatctgcaacaagtccgacacgaagatgctggaaatgctcaagccgtgtctggaagag
gcattcgtgatacaggatcgggatagtgccttggatcacatcggtcgtcgtggacagcag
caaggtacgaaggaccgcagaatacgatacgcaaaagacatcatgcagaaggagtttctg
ccccacatatcgcaagaagagggcagtgagaccaagaaagcattcttcctgggttatatg
gtaaacagactgctacaatgccatcttggtcgcacagatgaggacgatcgtgaccacttc
ggcaagaagcgtctcgaccttgcaggcccgctcatggcgcaggtgttccgcctgaagttt
cagcagctggtgaaggacatgaaggcctaccttcatcgctgcgtggagactggtagggag
ttcaacatcacactcgcggtgaagacgaacattctcacatctggtctgcgatactgcttg
gcgacaggtaactggggcgaccagaagaaggcggcaagtgccaaggctggggtgagtcaa
gtgctgaacagatacacatacgcttcgacgctcagccacttgcggagaacaaacaccccc
atcggccgtgacggcaagatcgcgaagcctcgacaacttcacaacactcattggggtctt
gtttgtcccgcagagacaccagaagggcaggcttgcggtctggtcaagaacttatccctg
atgtgctacgtcactgttggtactcctgcagaacctctggtcgacttcatgcgacaacgt
ggtatggatctgctggaggagtacgatccggtgttaaatccgaaggccaccaaagtcttc
ctcaacggaacgtggatcggtgtgcacaagaatgcaaatgacctcaccaacatgatgcgc
agccttcgacgaaagggtgtactcagcttcgaggtgaccatcattcgcgacgtcagagag
cgtgagatcaagatcttcaccgatgctggcagggtttgccgaccgctgttcgtcgtcgag
aatgatcccaagaacccgaacaacggcagcttagtcctacagcgcgagcattgccagaga
ctggcggatgaccaaaacgtccttgcggagctcgctggtgtcagcgaggaagagcgagag
cagaaggtgtttggctggaagggtctcgttgacgccggtgttgtcgagtacctcgatgcc
gaggaagaagagactgccatgatcatcatgacacctgaagacctggaagagcacaagctg
atgcgacaaggcgtgccaatggaggacacgagagctgatccacatcggcgtatcaagtcg
aagccgaatccgtatgtccggacttggacacattgcgagatccacccagccatgatcttg
ggcatttgcgccagcattattcccttccctgatcacaaccagtctccaaggaacacatac
caaagtgccatgggaaagcaagccatgggtgtgaccttgacgaactacaacacgcggatg
gacactatggcgaatgtgttgtactatccccaaaaaccacttgcgactacgcgcagcatg
gagtatctcaagttccgagaattgcctgcaggacagaacgctattgtcgcgatcgcgtgt
tactctggctataatcaagaagactccgtcatcatgaaccagagcagtatcgatcgaggt
ctgttcagatcacttttcttccgatcatacacggatcaagagaagcgagtcggaatgagt
gtggttgaggctttcgagaaaccaatccgatctgataccatgcgcatgaagcagggtacc
tacgacaagcttgatgaagatgggatcatcactccgggctcgcgcgtctcgggcgaggac
atacttatcggaaagaccgctccgatgcctccagatgctgaggagcttggtcaacgaaca
agtctgcacatcaagcgtgatgtcagcacaccgttgaggtccactgagaatggtgtcatt
gatcaggtactcctcaccaccaacacggaaggtcttcgtttcgtcaaggtgcgaacacga
gttacaaaagtcccacagatcggtgacaagtttgcatctcgtcacggacagaagggtact
gttggtatcacctatcgacaagaggacatgcccttcacagcagatggtctgacacccgac
atcatcatcaaccctcacgccattccctcccgtatgacaattgctcacttgattgagtgt
ctcctctccaaggtcggcgcactgaacggccaagaaggtgatgccacacccttcacagat
gtcacagtcacatccgtctccgacattctcgccagccacggcttccagcaacgtggcttc
gaagtcatgtacaacggccacaccggcaagaaactcaacgcccaagtcttcctcggacct
acctactaccaacgtcttcgccacatggtcgacgacaagattcacgcgcgtgctcgcggt
ccgctccagatcctcacgcgccagcctgtcgagggtcgtgccagagatggtggtctccgc
tttggagagatggagcgcgattgtatgattgcgcacggtgcttcagctttcttgaaggag
agattgctggatgtgtctgacgctttccgcgttcacatctgcgagatctgtgggttgatg
acaccggttgcgagcttgaagaagcagcaattcgagtgcaggccttgcaagaacaagacg
aagattgcgcagattatcattccgtatgcagcgaagcttctgttccaggagctggcggct
atgaatgtggctacgaggatgtttaccacgcggagtggtatcagcattcggtag
DBGET
integrated database retrieval system
