Fulvia fulva: CLAFUR5_12740
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Entry
CLAFUR5_12740 CDS
T08195
Name
(RefSeq) Putative rhamnogalacturonase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ffu
Fulvia fulva
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CLAFUR5_12740
Enzymes [BR:
ffu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CLAFUR5_12740
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
fn3_5
EMC7_beta-sandw
NOMO1-like_2nd
ChapFlgA_N
Motif
Other DBs
NCBI-GeneID:
71992618
NCBI-ProteinID:
XP_047768439
UniProt:
A0A9Q8PKE0
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Position
11:join(657243..657498,657543..658855,658909..658938)
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AA seq
532 aa
AA seq
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MSVRTLLLGLLSLASTAFAAFGYTESSASFVVDAGSANSLVVTIEKSSCDVTSIVYRGVE
IQSQTTGTHIGSGLGTATVSADTIDEQYIKVTCETDTLTQYLVFVSGDSNIYLATYITAE
PSVGELRYIARLDSSVLPSEYPFGEVSTTKPSTSTIEGSDVFVVDGETRSKFYSSERFID
DHVHCVYGDDIHACFVKPVSAYETSSGGPFFRDINSNNGGDYTSLTFYMNSGHVQTEDRR
MGLYGPYALTFSRSGIPKLADFDLFFFVDLDIEGYVPASGRGYVSGTASGVPSDFQPVIH
WFNSAAQYWTYASSSGTFTSPAMKPGTYTMKLYRTELEVASQSVTVSAGATKTSNIASTL
SNPATSLWTIGTCDGQPTGLLNADKQLRMHPSDSRMSDWAPGTFTVGTSSDSSFPMALFK
DINSPQTLSFNLDDASAGATLRIRTTLAFASGRPQITVNDWTSEGPAAPVKIDSRGVTRG
AYRGCGESYEFEVPEGELVEGANTVAIRVISGSSGEAFLSPNFIVDCIEMYR
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccgcactctgttgctcgggctgctgagcctcgcgtcaactgcctttgctgcc
tttgggtataccgaatcctcagccagcttcgtagtcgacgcaggttcagccaacagtctt
gttgtcaccatcgagaagtccagctgcgatgtgacttccatcgtctaccgaggcgttgag
attcagtcacaaacgacgggaacccatattggttcaggtctgggcactgcgacggtctct
gcagacaccattgatgagcaatatatcaaggtcacgtgtgagacagacacgctcacgcag
taccttgtcttcgtctctggtgacagcaacatctatctcgcaacctatatcacagcggaa
ccttcagttggcgagctgcgttacatcgcacgtcttgatagctctgtcttaccgtccgaa
taccccttcggagaggtctcgactacgaaacccagcacttctacaatcgaggggtcggat
gttttcgttgtagatggcgaaacgcgaagcaagttctactcgtcagagcgcttcatcgac
gaccacgtccactgcgtctatggcgacgacatccatgcttgcttcgtcaagccagtctcc
gcatacgagacatcatccggtggtcccttcttcagagacatcaacagcaacaatggcggc
gactacacatctctcacattctacatgaactccggccacgtccaaaccgaagaccgccgt
atgggtctctatggaccatacgccctgaccttcagccgcagcggtatccccaaactggca
gacttcgacctcttcttctttgtcgacctcgatatcgaaggctacgtcccagcctccggt
cgcggctacgtctccggcacagcctcgggtgtccccagcgactttcaacccgtcatccac
tggttcaactccgccgcgcaatactggacctacgcctccagcagcggcactttcacatcc
ccagccatgaagccagggacctacaccatgaaactctaccgcacggagctcgaagtcgcg
tcccaatccgtcaccgtctccgccggcgcaacgaaaaccagcaacatcgccagcaccctc
tccaaccccgccacatccctctggacgatcggcacctgcgacggtcaacccaccggcctc
ctgaacgccgacaagcaactccgcatgcacccctccgactctcgcatgtcagactgggca
ccaggcacattcacagtcggcacatcatcagattcctccttccccatggccttattcaaa
gacatcaacagccctcaaaccctctccttcaatctcgacgatgcaagtgctggcgccaca
cttcggatcaggactacgctggcttttgcgagtgggaggccgcagattacggtcaatgat
tggacgagtgagggtcccgcggcgccggtcaagattgatagtcgtggggtcacgaggggc
gcgtatagagggtgtggggagagctatgagtttgaggtgccggagggggagttggtggag
ggcgcgaatacggtggctatcagggtgatttcgggaagttctggggaggcgtttttgagt
ccgaattttattgtggattgtattgagatgtacagatag
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