Fulvia fulva: CLAFUR5_12817
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Entry
CLAFUR5_12817 CDS
T08195
Name
(RefSeq) ATP-dependent RNA helicase dhh1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ffu
Fulvia fulva
Pathway
ffu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLAFUR5_12817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_12817
03036 Chromosome and associated proteins [BR:
ffu03036
]
CLAFUR5_12817
Enzymes [BR:
ffu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLAFUR5_12817
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CLAFUR5_12817
mRNA degradation factors
5'-3' decay
Decapping complex
CLAFUR5_12817
Chromosome and associated proteins [BR:
ffu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
CLAFUR5_12817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
71992695
NCBI-ProteinID:
XP_047768453
UniProt:
A0A9Q8UVP6
LinkDB
All DBs
Position
11:1100827..1102383
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AA seq
518 aa
AA seq
DB search
MADGLAAELDGTSLNDSQSGDWKQGLQAPAKDGRQQTEDVTATKGLEFEEFYLKRELLMG
IYEAGFEKPSPIQEETIPVALSGRDVLARAKNGTGKTAAFVIPTLERINTKSDKIQALLL
VPTRELALQTSQVCKTLGKHLGVNVMVTTGGTGLRDDIVRLNEPVHIVVGTPGRILDLAG
KGVADLSEAKTFVMDEADKLLSPEFTVTIEQLLKFHPKDRQVMLFSATFPVVVKDFKDKH
MNDPHEINLMDELTLRGITQYYAFVDEKQKVHCLNTLFSRLQINQSIIFCNSTTRVELLA
KKITELGYSCFYSHAKMLQQHRNRVFHDFRNGAMRNLVCSDLLTRGIDIQAVNVVINFDF
PKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYRIEQELGTEIQPIPQSIDKKLYVY
DTPENIPRPINTAPQQRQQQQQQQAAQNASRQQGTGSDLQNPANRTDGYGRGRGGGYGRG
RGGPRNDQNGFQGQQRQGGYQQRPNQQMAPAGPPAAQA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgggcttgcggccgagctcgacggcacctcgctaaacgactcacaatccggc
gactggaaacaaggcttgcaagcgccggccaaagatggcaggcagcaaacagaggatgtc
accgcgacgaaaggcctggaatttgaggagttctacctgaagagagagctgttgatgggt
atatacgaagcagggttcgagaagccctcacccatccaagaagagacgatcccagttgca
ctatcaggccgcgacgttctcgcgcgcgcaaagaacggcacaggaaagactgctgccttc
gtcatccccacacttgagcgcatcaacaccaagtcggacaagattcaggctctgttgctg
gtgcccaccagagaattggctctgcagacgtcgcaagtatgcaagacgcttggcaaacac
cttggtgtcaatgtcatggtcaccacaggaggaacgggactgcgtgatgacattgtacgt
ctcaacgagccagtacacattgtcgtcggaacacctggccgtattttggacttggctgga
aagggtgttgccgatctgtcggaagccaagactttcgtcatggacgaagccgacaagctg
ttgtcgccagaattcaccgtcactattgagcagctgctcaagtttcaccccaaggacagg
caggtcatgttgttctctgccaccttccccgtcgtggtgaaggacttcaaagataagcac
atgaacgatcctcacgagatcaacctcatggacgaacttactctgcgtggtattacccag
tactatgccttcgtcgacgaaaagcagaaggtgcactgcttgaacacgctttttagcaga
ctgcaaatcaatcagtccatcattttctgcaacagcaccaccagagtcgagttgctggcc
aagaagattacagagcttggttactcctgcttctactcgcacgcgaaaatgctgcaacaa
catcgaaaccgcgtcttccacgactttcgcaacggcgccatgcgcaatcttgtatgctca
gatctactgacacgtggcattgacattcaagctgtcaacgtcgtcatcaacttcgacttc
ccaaagaacgccgaaacctaccttcaccgtatcggtcgttctggacgttttggacatctg
ggtctggctatcaacttgatcaactgggatgatcgattcaatctgtaccgtatcgaacag
gagcttggaactgagattcagcctatcccgcaatccatcgacaagaagctgtacgtgtat
gacacaccagagaacatcccccgaccaatcaacactgcaccacaacagaggcagcaacaa
cagcagcagcaggcagcgcagaatgctagcagacagcaagggacagggtctgacctgcag
aatcctgccaaccgaaccgacggctacggccgcggcagaggtggtggctatggcagaggc
cgtggcggacctcgcaatgatcagaatggcttccagggccaacagagacagggcggctac
cagcagcggccgaatcagcagatggcgcccgctggtcctcccgcggctcaggcttag
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