Fulvia fulva: CLAFUR5_13003
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Entry
CLAFUR5_13003 CDS
T08195
Name
(RefSeq) Nucleoporin
KO
K18715
nucleoporin NUP159
Organism
ffu
Fulvia fulva
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_13003
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CLAFUR5_13003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP214
YL1
Fez1
Nop14
Motif
Other DBs
NCBI-GeneID:
71992881
NCBI-ProteinID:
XP_047768339
LinkDB
All DBs
Position
11:complement(2020680..2025260)
Genome browser
AA seq
1526 aa
AA seq
DB search
MAATQTGAKVPTVEDGKNVFFQNLGVGGSDRLQAGESWPYDNLPSPTASLLAIASRKGVL
VVGTPTGLDISSTEKTRRSYIKRRTEKQEPVQPLDVDVHIDISRVSHVAFTADEAWLVVA
SEGCGRLSVYSTDHLANGARPAHEIDISGENVRHLSTNPQDEPVSGHRNVCAVITGNGSL
LFIKVSESNDIYSNFQGNKVFYNNVASGTWSKMGKQFVAGLSDGTAVRIDPLNSSKENVV
ETIPRAPQLDGPVTDPDYSNVTAVALTAISWLKTKGGMSYLFVYSPVYAPYSDPDDAGND
SQESLYFIAERTPNQQSYTFRPFERAPTDDFGMKRRTPASQNIIRLSDWHKAEEILVIGS
TVCAELGMVTEFKEAVHDDAPAGYAGYFTDDQHKVSMPYSDANLTDGSPVGLALDLGTTE
VAPAPVKDDEDILPHSKLPLPALYVLDFSGILSIYWIVYVEAIRASVFAPGIVHRSGRYA
KYQKINPRDTISTEEYKGISTASGQEPVETEPLDATSPTDAPRSGSPFAALPSNSAQSTP
SSGAPVASQPTAAFGQPSQQSTSTFGQPSTSGFGQATTPGGFGQPSTPGGFGQPGKPAFG
QASTPGGFGQPSKPAFGQASTPGGFGQPSAPAFGGTNTMGQTKSPWGQPAASPAGQSPFG
AKLAGPSPFAAAAAGKTSGFGQPSTPGQAGSASAFGSVGQLGANKPNPFGGNASGGTSAF
ASVGQSIASPFSKPALLQGGSNLSGFGNLSSAESGNTVSGFGSGSSFASSSFNSKEAVSR
ESTMNEGTQQQSSGLSGMGGFKLGSGFKGDGSAKDDLPMPKNPGAGLFGSDFGNSLGVTS
GERPSPFIKQEPGTGTQTSMKDIPAASSNDAPLPPDPSTYKPPKGWNDDIPGAGAPVNMK
PSTNDAPLPHDPTTPANWNADIPGAGPAVNAKTPEKDIPIAGSPPVDVTNSQSFGDALSE
IAGPSDEDSEDWAEDDDDGEGDEDEEDDDEDEDEDEDDDQEEEEEEEESEEDETADEEVP
YQPQNPAGLAAFKARMQPPGPKSPEPQRSRNESRTPQSDEKSMKSSYTPAGLPKGPVFPP
PAAKPQHSPRSPSPQRAVTSPVRPRDLQLPASIKATAVPPAKPLERPAPAPKPRDPTVGE
LADQAAQRVEAELARPVEPTTELPPFYAHTDYTGNVDTPGIGGQIEKVYRDINSMVHTVG
LNARSINSFLDGHEKMRQPGKRTRDDLDNPDAWLLGDVADLGRIIDEINTQLENGKLEGA
SETLADISQAHNEVLKLKAQSTEIRKQVQAHKDPERLAALDAAPLDIETKAQQSELRSGV
QRVQQLLADIEQKMTMLRADLASLSHRDGQPNGQSPVPTVEAVMNTIRRMTAAVQQKSAD
IDFLEAQIKRLPNGIESLRLDDNYEDDLASRLGNNRLLADRGSPAATPPRRPRMAANGDA
LGMSGMFGTSSRFATPPSASMRQSTRFTPDLGRSTNSLNGSARKKMMDVTAEEVEEFHAK
AARRRNVLGALKKRVETNGARVIRAA
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaacgcagactggagccaaggtaccgacagtagaagacggcaagaacgtcttc
ttccagaaccttggtgttggtggatccgataggctgcaagcgggcgagtcgtggccttac
gacaacttgccctccccgacagcttcactcctagccattgcatcgaggaagggcgtgttg
gttgttggaacacctactggtctggatatttcgagcacagaaaagacgcgcagaagctat
atcaagcggcggacggagaagcaagagccagtgcagccactcgacgtagatgtccacatt
gacatttcacgagtgtcacatgttgcctttactgcagatgaggcatggctggtggttgcg
tccgagggatgtgggcgtctatctgtatactcgaccgatcacttagccaacggcgctcga
cctgcgcatgagatcgacatctcgggagagaacgtgcggcatctctccaccaatccccag
gacgaaccagtgtcagggcaccggaacgtatgcgctgtcataacgggcaatggcagtctg
ctcttcatcaaggtgtctgaaagcaacgatatctacagcaactttcagggcaacaaggtc
ttctacaacaatgtagcctccgggacgtggtcgaagatggggaagcagtttgttgctgga
ctctctgacggcactgctgttcgcatcgatcccctgaactcttccaaagaaaacgtcgtc
gagaccatcccgagagcaccgcaactggacggaccagtcacagacccggattactcgaat
gtcaccgcagttgctctaaccgccatttcctggctcaagacgaaggggggtatgtcgtac
cttttcgtttacagtcctgtctatgcaccatattcggaccccgacgatgctggcaacgac
tctcaagagtccctctactttatcgcagagcgcacaccaaaccaacaaagttatactttc
aggcccttcgaacgagctccgacagacgacttcggcatgaagcgaaggactcccgcaagc
caaaatatcatccgcctcagcgactggcacaaggctgaagagattcttgtcattggatcg
accgtctgtgccgagctaggtatggtcacggaattcaaggaggcagtgcatgatgatgct
ccagctggctatgcgggttacttcaccgacgaccagcacaaagtgagcatgccatatagt
gatgcgaaccttacagatggatctcccgtcgggctggctctcgatcttggtactacagag
gtggctccggcgcctgtcaaggatgacgaagacattctaccgcattcgaaactcccgtta
ccggctctgtatgtcctagatttcagcggtattctgtcaatctactggatcgtgtatgtc
gaggcaatccgtgcgagtgtcttcgcgcccggtatcgtccacagatcagggcgatacgcc
aagtaccagaagatcaatcccagggacacgatttcgactgaagaatataagggaattagt
actgcgtccggtcaagaacctgtggagacagagccacttgatgctacctcaccgaccgat
gcacctaggtccgggtctccctttgcagcgctgccttccaactcggctcaaagtacaccc
tcttcaggcgcacctgtagcgagtcaaccaactgcagcttttggtcagccttcacaacag
agcacctcgacgttcggacagccaagcacgtcagggtttggacaagcgactacaccagga
ggcttcggacaaccaagcacgccaggaggctttggacaaccaggtaagccagcattcggg
caggcaagcacaccgggaggatttggccagccaagcaagccagcatttggacaagcgagc
acacctggaggcttcgggcagccaagcgcgccagcgttcggggggaccaacaccatggga
cagactaagagtccctggggacagccggcagcttcaccagctggccagtcgccatttggt
gcgaagctagctggtccgtcaccattcgcagcagcagcggcaggcaagacttctggcttt
gggcagccttctacgcccggccaggctggatctgcatctgcatttggctcagttggtcag
ttgggcgcaaacaagccaaacccgttcggcggaaacgcgagcggtggtacgagcgccttt
gccagcgtcggccaaagtatcgcaagtcccttctcgaagcctgccttattacagggcgga
tcgaatttgtctggctttggcaatctatcctcggcagagtcaggcaacaccgtaagtggc
ttcgggtcaggttcgtcattcgcatcgagctctttcaacagcaaagaagcagtctccagg
gagtcgaccatgaacgaaggcacacaacaacaaagcagcggtctgtccggtatgggcggc
ttcaagctcggttctggcttcaagggcgatggctcagccaaggacgatctgcccatgccg
aagaacccaggcgcaggtctgttcggctccgactttggcaactccctcggcgtgacttcc
ggtgaacgaccctcgcctttcattaagcaggagcctggtactgggacgcagacgtcaatg
aaggatatacctgctgcatcatcgaacgatgcgcctctgccgccagacccttcaacgtac
aagccacctaaaggttggaatgatgacatccctggagctggtgcgcctgtcaacatgaag
ccatccacaaacgacgcgccgcttccccatgatccgactactccagccaattggaatgct
gacattcccggcgctggtcctgctgtgaacgccaaaacccccgagaaggacataccgata
gcaggcagcccgcctgtggatgtcaccaacagccagtctttcggagatgctttgtccgag
atagctggaccttccgatgaggacagcgaggactgggcagaagacgatgacgacggcgaa
ggtgatgaagatgaagaggatgatgatgaggacgaggacgaggacgaggatgacgaccaa
gaagaggaggaggaagaggaagagagtgaggaagatgaaactgcagatgaagaggttcca
taccagccgcaaaatcccgcaggccttgcagcgttcaaggcgcgcatgcaaccaccaggg
ccaaagtcgcccgagccgcagaggtcgaggaacgaatcacggactcctcaatcggacgaa
aagagcatgaagagtagctacaccccggccggtctaccgaaaggtccagtatttccaccg
ccggctgcaaaaccacagcacagcccacggtctcctagcccacaacgagcagtcactagt
cctgtccggcctcgagacctacaacttccagcttcgatcaaggcgactgctgtaccgcct
gcaaagcctttggaacgacctgctcctgcaccgaagcctcgggatccaactgtgggagag
ctcgcagatcaggccgcgcagcgcgtagaagcggagcttgcaaggcctgtcgagccgacc
actgagctgcctcccttttacgcccacaccgactacacgggcaatgtcgacacacccggc
attggtggccaaattgagaaagtttaccgtgatatcaactccatggtgcatactgtggga
ctgaacgcgcgctcgatcaattcgttcctggacggtcatgagaagatgaggcagcccgga
aagcgcacacgggacgacctcgacaacccagacgcgtggctgctgggtgacgttgccgac
ctcggtcgcatcattgacgaaatcaacacacaactcgagaatggcaagctagagggcgct
tctgagacgctagcagatatctcacaggcgcataacgaagtcttgaaactcaaagcacag
tccacggagatccgcaagcaagtacaggcacacaaggaccccgaacgccttgctgcacta
gacgccgcaccactggacatcgagacaaaggctcagcaatcagaacttcgatcaggcgtg
cagcgtgtccagcagctgctcgctgacatcgaacagaagatgaccatgcttcgcgccgat
ctcgcttcactttcccacagggacggccagcccaatggtcagagtcctgtgccaactgtc
gaggccgtcatgaacacaatccggagaatgacagcagcggtgcaacaaaagtcagccgac
attgacttcctcgaagcgcaaatcaaacgcctccccaacggcatcgagtccctccgcctg
gacgacaactacgaagacgacctcgcatcccgtctcggcaataaccgactcctcgccgac
cgcggtagcccagctgcaacgccaccgcgaagacctcgcatggccgccaacggcgacgcg
ctcggtatgagcggcatgttcggaacaagctcgagattcgcaacccccccttcagcttcg
atgcgacaatcgacgcgtttcacgccggatctggggaggagtacgaatagcctgaatggc
agtgcgaggaagaagatgatggatgtgacggcggaggaggttgaggagtttcacgcgaag
gcggcgaggaggcggaatgtgctgggtgcgttgaagaagagggttgagacgaatggcgcg
agggtgattcgagcggcctag
DBGET
integrated database retrieval system
