Fulvia fulva: CLAFUR5_13087
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Entry
CLAFUR5_13087 CDS
T08195
Name
(RefSeq) putative rhamnogalacturonate lyase C
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ffu
Fulvia fulva
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CLAFUR5_13087
Enzymes [BR:
ffu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CLAFUR5_13087
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Gene cluster
GFIT
Motif
Pfam:
fn3_3
CBM-like
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
71992965
NCBI-ProteinID:
XP_047768323
UniProt:
A0A9Q8PK90
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Position
11:complement(join(2368386..2368593,2368644..2370448))
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AA seq
670 aa
AA seq
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MAFLRTFAALAILAASANALLITNETSSRLTLSNNDLTVSLNKSTSHIDTLTLSGQNLLG
TQSGSTGIGPYLDCYCTPSGAYTPGRIAPQYTLLSGTDATNTSWGAIVLTETYPSTNQTL
SQYWFLRDGETGLHTFSRLTYHNASQPLLRNLQEFRTLFRPNTRLWTHLSTNERQYAPLP
YHNPAASDPGNAITVQDATWYLPNASDPYVLAESDYFTKYTFSDTWRDHKVHGLFSDGST
SADGSTFGAWFVMNTIDTYNGGPTHSDLTVDGIVYNYIVSNHHGNQVPNITDGFERTYGP
GYYHFNKGAADASLEELRQDAERYADPEWNAEFYDSIAKVVPGYVPSAGRGAWSGKVVLP
KGAMRPVAILTESGRNWQDNVFEPDTYQYWADVDAGTGEVEIGRVKAGTYRLTVYADGAF
GQFEVDDVVVEAGKTTTTDVAWTEESWGVELWRIGTPDKSSGEYRHGYQPDPDHPLHPEE
YRIYWAVYDFVDDFPEGVTFEVGKDNVTEDLNYVHWSVFGGYANSIRTEPYYGDGNVNNW
TVLFDVSDTQIRNHSQATLTVQLAGAKTAAGNTDVFNVTQPYSNLPFVVNVNGDDLEPWT
IPYNQSSSCAVRSAVICYNIAHKFVFDASVLKGGQNELILSLPFNATDYESALLPESVYV
QYDALRLEIR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcattcttgcggaccttcgctgcccttgccatcttggcagcaagtgccaacgccctc
ctcatcaccaacgaaacctcctcccggttgacactctccaacaatgacttgacagtctcc
ctcaacaaatccacctcccacatcgacaccctcaccctctccggccaaaacctcctcggc
actcagtctggatccacaggcataggcccttacctcgactgctactgcactccctctggc
gcctatactcccggccgcatcgcaccacagtatactctcctctccggcaccgatgccaca
aacacttcctggggcgcgatcgtcttaacagagacctacccctcaaccaatcagaccctc
tcccaatactggttcctccgcgatggcgagacgggtctgcataccttcagtcgtttgaca
tatcataacgcctctcaaccgttgttgcgaaacctccaggagttccgaacgctattccgc
cccaacactaggctctggactcatctgagcacaaacgagcgccagtacgctcccttacca
taccacaacccggccgcctccgatccgggcaacgctataacagtccaagacgcaacatgg
tacctccccaacgcctccgacccctacgttctcgccgaatcggattacttcaccaagtac
accttctccgacacatggcgcgaccataaagtccacggtctcttctctgacggatccact
tccgctgatgggagtacgttcggcgcctggttcgtcatgaacaccatcgatacgtacaat
ggaggaccaacgcattcggacctgacggtggatgggattgtgtataattacattgtgagc
aatcaccatggcaatcaggttccgaatattacggatggatttgagaggacttatgggccg
ggttattatcacttcaacaagggtgctgcggatgcgagtttggaggagttgaggcaggat
gcggagcggtatgcggatcctgagtggaacgcggagttctatgattcgatagcgaaagtt
gtgccggggtatgtaccgagtgctgggagaggagcgtggagtgggaaggtcgtgttgccg
aaaggtgcgatgaggccggtggcgattctgacagagagtgggaggaattggcaggataat
gttttcgagccggatacgtatcagtactgggctgatgttgatgctgggactggggaagtt
gagattggaagggtgaaggctgggacgtatcggctcacggtatatgctgatggggcgttt
ggacagtttgaagtcgatgatgtcgttgtggaagctggcaagactaccacgacagatgtg
gcatggactgaagagtcttggggagttgagctgtggcgaattggcacgccagacaagagc
agtggtgagtacaggcacggctaccagccagacccagatcacccgcttcatcccgaggag
tatcgcatctactgggcagtgtacgactttgtggacgacttccctgaaggcgtgaccttc
gaggtcggaaaggacaacgtgactgaggatctcaactacgtccactggagcgtcttcggc
ggctatgcgaactcaatccgaacagagccatactatggtgacggcaatgtcaacaactgg
accgtactctttgacgtgtccgacacccagatcaggaaccactcgcaggccacattgaca
gtgcaactggcgggcgcaaagaccgctgctggcaacaccgatgtcttcaacgttacccag
ccttactcgaatctgccattcgtggtcaatgtgaatggggacgatctagagccgtggacc
atcccgtacaaccaaagcagttcctgtgcagtgcgatccgctgtaatatgctacaacatt
gcacacaagtttgtgttcgatgccagcgtcctgaaaggtggccagaatgagctgatcttg
agcttgcctttcaacgcgacggactatgagtcggcactgttgccagagtcggtgtatgtg
cagtacgatgcattgcggctggagatccgttag
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