KEGG   Fulvia fulva: CLAFUR5_13353
Entry
CLAFUR5_13353     CDS       T08195                                 
Name
(RefSeq) Vacuolar protein sorting-associated protein 4
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
ffu  Fulvia fulva
Pathway
ffu03250  Viral life cycle - HIV-1
ffu03272  Virion - Hepatitis viruses
ffu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ffu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CLAFUR5_13353
   03272 Virion - Hepatitis viruses
    CLAFUR5_13353
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CLAFUR5_13353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ffu04131]
    CLAFUR5_13353
   03400 DNA repair and recombination proteins [BR:ffu03400]
    CLAFUR5_13353
Membrane trafficking [BR:ffu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    CLAFUR5_13353
DNA repair and recombination proteins [BR:ffu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    CLAFUR5_13353
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_16 RuvB_N AAA_5 AAA_22 RNA_helicase TIP49 AAA_14 AAA_2 DUF815 IstB_IS21 AAA_25 AAA_17 AAA_24 AAA_18 AAA_33 NPHP3_N nSTAND3 Parvo_NS1 AAA_7 Mg_chelatase AAA_28 DUF5906 Torsin Cytidylate_kin ATPase_2 NACHT PhoH AFG1_ATPase bpMoxR USP8_dimer
Other DBs
NCBI-GeneID: 71993231
NCBI-ProteinID: XP_047768215
UniProt: A0A9Q8PJL0
LinkDB
Position
11:complement(join(3291003..3291675,3291727..3292355))
AA seq 433 aa
MSNTDFLGRAIEQVKKAIEMDTAGDYDKAYQQYYQALELFMLALKWEKNAKSKEMIRQKA
GEYMERAEKLKNHLAEQDGKRKPAAMGANGKASNGAGKGQNEDDEQDADSKKLRGALAGA
ILTDKPNIKWEDVAGLEGAKEALKEAVILPIKFPHLFTGKRQPWKGILLYGPPGTGKSYL
AKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFNLARENKPSIIFIDEIDALCGPRG
EGESEASRRIKTELLVQMDGVGRDSKGVLILGATNIPWQLDAAIRRRFQRRVHISLPDQP
ARMRMFELAVGNTPCELQADDYRTLAKYSEGYSGSDISIAVQDALMQPVRKIQTATHYKK
VTVDGEEKLTPCSPGDEGAMEMNWTQVETEQLLEPPLQVKDFIKAIKASRPTVSGEDLHR
NEDWTKEFGSEGA
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgtcgaacaccgacttcctgggacgtgcgatagagcaggtcaagaaggcaatcgagatg
gacacggcaggcgactacgacaaagcataccaacaatactaccaagcactcgagctcttc
atgctggcgttgaaatgggagaagaacgcaaagtcaaaggagatgatcaggcagaaggca
ggcgaatacatggagcgcgcagagaagctcaagaaccacttggcagaacaggacggcaaa
cggaaaccggcggcgatgggtgctaacggcaaagcgtccaatggtgccgggaaaggccag
aatgaggacgacgagcaggatgcagacagcaagaagttgaggggagcgctggcgggtgcc
atcttgacggacaagccgaacatcaagtgggaagatgtcgctggtctggagggtgcgaag
gaggcgctgaaggaggccgtcatattacccatcaagtttccacatctgttcactggaaag
aggcagccgtggaagggaatactgctgtatgggccgcccggtacgggtaaatcgtatctt
gcgaaagcagtcgcgacggaggcgaacagtaccttcttcagcgtgagttcgtcagatctg
gtcagcaagtggatgggagagtcggaacgattggttaaacagctcttcaacctcgcccgc
gaaaacaaaccctccatcatcttcatcgacgaaatcgatgccctctgtggcccccgagga
gaaggagaatccgaagcatcacgacgtatcaagacagaactgctcgtccaaatggacggt
gtaggccgcgacagcaaaggcgtcctcatcctcggcgcaacgaacatcccctggcaactc
gatgcagcgatacgaagacgattccagcgacgagtacacatctccctccccgaccagccc
gcgcgaatgcgaatgttcgaactcgcagtcggcaacacaccctgcgagctacaagcagac
gactacagaacgctggcaaagtattcagaaggatactcgggaagtgatatcagtatcgcg
gtgcaagatgcgttgatgcagcctgtgaggaagatccagacggcgacacattacaagaag
gtcacagtggatggggaggagaagttgacgccttgttcgcctggggatgaaggagcgatg
gagatgaattggacacaagtggagactgagcagttactggagccgccgctgcaggtcaag
gacttcatcaaggcgatcaaggcttcgcggccgacggtcagtggggaggatctgcatagg
aatgaggattggacgaaggagtttgggagtgagggcgcatga

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