Fulvia fulva: CLAFUR5_13674
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Entry
CLAFUR5_13674 CDS
T08195
Name
(RefSeq) Nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
ffu
Fulvia fulva
Pathway
ffu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLAFUR5_13674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_13674
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CLAFUR5_13674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
dsDNA_bind
Motif
Other DBs
NCBI-GeneID:
71993552
NCBI-ProteinID:
XP_047768982
UniProt:
A0A9Q8PLG2
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Position
12:complement(1150057..1152267)
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AA seq
736 aa
AA seq
DB search
MPRQYHANMATQTTTLQQTILAPGAAATGATPTERTRFYKEFLTPALHRRFIKAVGILLA
VCYVFGIIITSFRGTIVTAWFPLGPAGARASLLLITCLSILVVRVANMHIGERITSSVAE
TAYDLVWRRLGKSLHTVGWYALSGWLFGEFYVWTRGDSAELGLVLPYESYERPRLNENPI
FLRSLFIVLGVLQAGLHLVKDYDCVKIPATPREEREKEEEAKKNALTRILSPEAVARLPA
VVRTLADKLGPIVHGAVNITIITVIAHLFIYFLVLRRPLWSFFYSMARTWFQLPSSAPPP
GISDLHIWALFRQTLTAPLALSILWEISNTIFSVFVAQAPILKDAPLTSGVKDARGVVLR
KSKDPNSSLLNGLKTKRELNKTFAFWELYLIATKYDDRRKTIYTEVARKDGSTWSQICDI
ALKEVEAITARIQAATVPEQKPVVREEQPLQRLTEDDLGTPKPEKRGLPKIADREVAGDG
DVFAKKAPDLVQTFGNFARSVGQSANTQNPITPTALKYIEYGADQLIPKETQQRLSRSHM
QEEANGFFAKVLRSPIGEAFKNTFARQVKKVVFGSPTSNKANIVFAVKSLTELGVKSLSE
DDYGQVQKDIPRIIRTFTTTIKNIETYTRTLKPNWTDLGFTEQDRQVAEVQELLEILKTS
LKQIMLQFGEYANTLGLSKKEVREAGEATGDTPAPVALIGGRPTRPNDGAFERPEMQQVG
NDGGIGAGGRLRRTGR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgacaataccacgcaaacatggcgacgcaaacgacaactctgcagcaaaccatt
ctcgcgccgggagctgctgcgactggagcaactcccacagaacgaactcgattctacaag
gagttcttgacccccgcactgcaccggcgcttcataaaagcagtgggcatactgctcgct
gtctgctatgtcttcggcataatcatcacaagcttccgcggcaccatagtaacagcatgg
tttccgctcggtccagctggagctcgcgcatcacttcttctcataacatgtctctccatt
ctggttgtacgggtcgcaaacatgcacattggcgagcgcatcacgagcagcgttgcagag
acagcgtatgatctggtgtggaggagactgggcaagtcactgcacacagtcggatggtat
gctctttcaggctggttgtttggggagttctatgtctggacgagaggtgacagcgcggag
ctgggcttggtgctaccttacgagtcgtatgagcgaccgaggctgaacgagaatcccatc
ttcttgaggagcctcttcattgtgctaggagtgttgcaagccggactgcacttggtgaag
gactacgattgtgtcaagatacccgcgactccacgagaagagcgggagaaagaggaagag
gcgaagaagaatgccttgacaaggatcctctcaccagaggctgtcgcgagactaccagcg
gtggtgcgaacattggctgacaagctgggcccgatcgtgcacggtgctgtcaacatcacc
attatcaccgtcatcgcacatctcttcatatacttcctggtcctgaggcggcctctctgg
tccttcttctacagtatggcacgaacctggttccagctaccgagctctgcaccaccacca
ggcatttccgacctacacatttgggctctattccgccagacattgacagcaccactggca
ctatcgatcctgtgggagatctcgaacaccattttcagcgtctttgtcgctcaagcaccg
attctgaaagatgcgcctctgaccagtggggtcaaggatgccagaggtgtcgtgctgcgc
aagagcaaagacccgaacagcagcttgttgaatggcttgaagacaaagcgggagctgaac
aagactttcgccttctgggagctatatctcattgccaccaaatacgacgacaggcggaag
acaatctacaccgaagttgcaagaaaggacggcagcacgtggtcgcagatctgcgacatt
gccctgaaggaagtggaagcgatcactgcgcgtattcaggcggcgaccgtaccagagcag
aagccggtggtgagagaggagcaacccctgcagcgattgactgaagatgatcttggaacg
cccaaaccagaaaagagaggtctcccgaagatagcagatcgcgaagtagccggtgatggc
gacgtcttcgcaaagaaggcaccagatcttgtacagacattcggcaactttgcgaggagc
gtcggccagtcggcaaacacccagaaccccatcacacccaccgcgctgaagtacatcgaa
tacggcgcggatcagcttatcccaaaggagacccaacagcgtctgtctcgtagccacatg
caagaagaagcaaatggcttcttcgctaaggtgctccgatcaccaatcggcgaggccttc
aagaacacctttgcgcgtcaagtcaagaaggttgtcttcggctcacctacctcgaacaaa
gccaacatcgtcttcgccgtgaagtccctcaccgagctgggcgtgaagagtctgtcggag
gatgattacggtcaagtgcagaaggacatccccaggattatccgcaccttcaccaccacg
atcaagaacatcgagacttacacacgtactctcaagccgaattggacggaccttggcttc
accgagcaggatcgacaagtagcggaggtgcaggagctgctggagatcctgaagacaagt
ctcaagcagattatgctgcagtttggcgagtatgcaaatactctgggtctgagcaagaag
gaggtgcgtgaagcaggcgaggctacgggtgatacgcctgctcctgtggcacttattggt
ggcagaccgacacggccgaatgatggggcgttcgagcgcccggagatgcagcaggttggc
aatgacggcgggattggcgccggtggtagactgcggcggactggtcgctag
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