Flavobacterium flavipigmentatum: LNP22_00520
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Entry
LNP22_00520 CDS
T10330
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
ffv Flavobacterium flavipigmentatum
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ffv03009
]
LNP22_00520
Enzymes [BR:
ffv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
LNP22_00520
Ribosome biogenesis [BR:
ffv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LNP22_00520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
UFH40514
LinkDB
All DBs
Position
104757..105359
Genome browser
AA seq
200 aa
AA seq
DB search
MLENTRHQHFILFKPYGYLSQFIYELKRKKKLLGEIYNFPQGTMAIGRLDEDSEGLLLLT
TDGKVSEQIRSKKVDKEYYVQVDGVITPEAIEQLQKGVEIGFDGGKYITKPCRAFIVTEV
PDFGPRAKKIRDERHGPTTWASITVNEGKFRQVRKMTAAVGFPTLRLVRVRIGNVYLQNL
KAGEVLEVSNFNIDDATQKL
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaaatacccggcatcaacattttatactttttaaaccttatggctatttaagt
caatttatttatgaacttaaaagaaagaaaaaacttttaggcgaaatttataatttccct
caaggcactatggccattggccgactggatgaagactcagaaggattgcttttgctaacc
actgacggaaaagtaagtgagcaaataagaagtaaaaaagtagataaagaatattatgtt
caggttgatggtgtaattactcccgaagctattgagcaattgcaaaaaggggtcgaaatt
ggatttgacggtggcaaatacattacaaaaccctgccgtgcttttatcgttactgaagtc
cctgatttcgggccaagagcaaaaaaaatcagagatgagcgccatggaccaactacatgg
gcgtctataacagtaaatgaaggaaaatttcgtcaggtacgaaaaatgactgcagcagta
ggatttccaacgttgcgattggttcgtgtacgcattggaaatgtatatttgcaaaactta
aaagctggggaagttttagaggtttctaattttaacatcgatgatgctactcaaaagctt
taa
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