Flavobacterium flavipigmentatum: LNP22_01555
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Entry
LNP22_01555 CDS
T10330
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ffv Flavobacterium flavipigmentatum
Pathway
ffv02024
Quorum sensing
ffv03060
Protein export
ffv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LNP22_01555 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LNP22_01555 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LNP22_01555 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ffv02044
]
LNP22_01555 (ffh)
Enzymes [BR:
ffv01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LNP22_01555 (ffh)
Secretion system [BR:
ffv02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LNP22_01555 (ffh)
Eukaryotic Sec-SRP protein
LNP22_01555 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
cobW
nSTAND3
AAA_17
CbiA
AAA_33
CLP1_P
AAA_24
DUF5693
APS_kinase
SDH_protease
KTI12
AAA_31
6PF2K
TsaE
NACHT
AAA_18
NPHP3_N
ATP_bind_1
KAP_NTPase
DO-GTPase1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UFH38974
LinkDB
All DBs
Position
complement(314901..316253)
Genome browser
AA seq
450 aa
AA seq
DB search
MFDNLSDKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTTKVKEKAI
GQDVLTTLQPGQLLVKLVKDELTELMGGDVAGINLSGNPSVILMSGLQGSGKTTFSGKLA
NFLKTKKNKKPLLVACDIYRPAAINQLHVVGDQIGVEVYSEPENKNPVEIAQNAIKHAKA
NGFNVVIVDTAGRLAVDKEMMDEIARVHKAIQPQETLFVVDAMTGQDAVNTAKAFNDILN
FDGVILTKLDGDTRGGAAISIKSVVNKPIKFVGTGEKMEAIDVFYPDRMAERILGMGDVV
SLVERAQEQFDEEEARKLQKKIAKNEFGFDDFLTQIQQVKKMGNMKDLVGMIPGASKAMK
DVEIEDDAFKHIEAIIHSMTPVERSKPAIIDVKRKARIAKGSGTKIEQVNQLMKQFEQMS
KMMKMMQGPGGKNLMKMMGGMKGMPGGMPR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaagtgataaattagataaagcgttccatatattaaaaggacacggg
aaaattacagaagtaaacgttgccgataccttaaaagaagtgcgtcgtgccttattagat
gccgatgttaactttaaaattgctaaagattttactaccaaagtaaaagaaaaagcaatt
ggtcaagacgttttaacgacgcttcagccaggacaattgttggtgaagttagtaaaagac
gagctaacagagttgatgggaggcgatgttgcagggattaatctttctggaaatccttcg
gttattttaatgtctggattgcaaggttctggtaaaacgactttctcaggaaaactagcc
aattttttaaaaacaaagaaaaataaaaaaccacttttggtagcgtgtgatatctaccgt
cctgcggcgattaatcagttgcatgtagtgggagatcaaataggagttgaggtatactca
gaaccagagaataaaaatcctgttgaaattgctcaaaacgcaatcaaacacgccaaagca
aacggctttaatgttgtgattgttgataccgccggtcgtttggcagtagacaaagaaatg
atggacgagattgctcgtgttcataaagccattcagccacaggaaaccttgtttgttgta
gatgcaatgacagggcaagatgctgtaaataccgcaaaagcattcaatgacatccttaat
tttgatggggtaatcctaaccaagttagatggtgatacccgtggtggagctgcaatttcg
attaaatcggttgtaaacaaaccaatcaaatttgtaggtacaggcgagaagatggaggca
attgatgttttctatccagaccgtatggccgagcgtatcttaggtatgggtgatgttgtg
tcgcttgtagagagagcgcaggagcagtttgatgaagaggaagccagaaaacttcaaaag
aaaatcgctaaaaacgaatttggttttgatgatttccttactcagattcaacaagtgaag
aaaatgggtaatatgaaggatttggtcggaatgattccaggtgcttcaaaagccatgaaa
gatgtagaaatagaagatgacgcttttaaacatatagaggccatcatacactcgatgaca
ccagtcgaaagaagtaaacctgccataatcgatgtaaaaaggaaagccagaattgccaaa
ggttcgggaaccaaaatcgagcaggtaaaccagctgatgaagcagtttgagcaaatgagt
aagatgatgaaaatgatgcagggcccgggcggaaaaaacctgatgaaaatgatgggaggc
atgaaaggaatgccaggcggaatgccgagataa
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