Flavobacterium flavipigmentatum: LNP22_02040
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Entry
LNP22_02040 CDS
T10330
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ffv Flavobacterium flavipigmentatum
Pathway
ffv00521
Streptomycin biosynthesis
ffv00523
Polyketide sugar unit biosynthesis
ffv00525
Acarbose and validamycin biosynthesis
ffv00541
Biosynthesis of various nucleotide sugars
ffv01100
Metabolic pathways
ffv01110
Biosynthesis of secondary metabolites
ffv01250
Biosynthesis of nucleotide sugars
Module
ffv_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LNP22_02040 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LNP22_02040 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LNP22_02040 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LNP22_02040 (rfbB)
00525 Acarbose and validamycin biosynthesis
LNP22_02040 (rfbB)
Enzymes [BR:
ffv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LNP22_02040 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
adh_short
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
UFH39068
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All DBs
Position
complement(418251..419297)
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AA seq
348 aa
AA seq
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MKKILITGGAGFIGSHVVRRFVNQYPECQIFNLDALTYAGNLENIKDIENQPNYNFIKGD
IVDELFINELFAIHNFDGVLHLAAESHVDRSIEDPLAFVKTNVIGTMNLLNAAKNQWKDN
FEGKRFYHISTDEVYGSLGAEGLFTETTSYDPNSPYSASKASSDHFVRAYGETYGLPYVL
TNCSNNYGSYHFPEKLIPLFINNIINNKPLPVYGDGNYTRDWLFVEDHAIAIDLVFHKGK
NHETYNIGGFNEWKNIDLVKLLCQIMDQKLGRAEGTSQELITYVKDRPGHDLRYAIDASK
INKELGWKPSVTFEEGLEKTINWYLTNEEWLKNVTSGSYKDYYQKQYS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattcttatcacaggtggtgcaggttttataggttctcacgtagtaagacgc
tttgtaaatcagtatcctgagtgtcaaatattcaatttagatgccttaacgtatgcaggc
aatctggaaaatataaaagatatcgaaaatcaacctaattataattttataaaaggagat
attgtagatgagctttttataaacgaattgtttgcaattcataactttgatggtgtgttg
catttggcagcagaatctcatgtagatcgttctatagaagacccgttagcatttgtaaaa
acgaatgttattgggacaatgaatttattgaatgctgcaaaaaatcaatggaaagataat
tttgagggtaaacgtttttatcacattagtaccgatgaagtctatggttctttgggagca
gaaggtctttttacagaaaccacttcttacgatccaaattctccttattctgcttcaaaa
gcaagttcagatcatttcgtaagggcgtacggcgagacctacgggttgccttatgtattg
acaaactgctccaacaattacggctcttatcattttcctgaaaaattaattccgcttttc
atcaataatattatcaataataaacctttaccggtttatggggatggtaattacactcgt
gattggttatttgttgaggatcatgctattgcaatcgacttggtttttcataaaggaaaa
aatcacgaaacgtacaatattggaggttttaatgaatggaaaaatattgatttggtaaaa
ttattatgccaaattatggatcaaaaattaggcagagccgaaggaacttctcaagaacta
attacttacgtgaaagacagaccgggtcatgatttacgttacgctatcgatgcctcaaaa
attaataaagaactgggttggaagccttctgtaacttttgaagaaggcttagagaaaacg
ataaactggtatttgaccaatgaagagtggctgaaaaacgtaacttctggttcttacaaa
gattattatcaaaaacaatattcataa
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