Flavobacterium flavipigmentatum: LNP22_03335
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Entry
LNP22_03335 CDS
T10330
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ffv Flavobacterium flavipigmentatum
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ffv03016
]
LNP22_03335 (truB)
Enzymes [BR:
ffv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LNP22_03335 (truB)
Transfer RNA biogenesis [BR:
ffv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LNP22_03335 (truB)
Prokaryotic type
LNP22_03335 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UFH39313
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All DBs
Position
687784..688479
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AA seq
231 aa
AA seq
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MTPEEYLDGQILLIDKPLKWSSFQAVNKLKYLLINKVGLPKKFKIGHAGTLDPLATGLLL
ICTGKFTKRITELQGQAKEYTGTFYIGATTPSYDLETEIDATFPTSHIDEALIRETVKRF
LGEIDQKPPIFSAIKKDGVRLYEHARAGETIEIASRKTTIHEFEITRIALPEIDFRVVCS
KGTYIRSLAFDFGKAMNSGSHLTVLRRTKIGDYDVKDAIDVTLFEESLKLQ
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgacacctgaagaatatcttgacggacaaattttattgatagacaaacctttaaaatgg
agttcgtttcaagctgtcaataaattaaaatatttactgattaacaaagtcggacttccc
aaaaaattcaaaattggtcatgccggaactttagatcctttagccaccggactattgttg
atctgtacgggaaaatttaccaaaagaattaccgaattgcaaggccaggccaaagaatat
actggaactttttacatcggtgccactactccatcttatgatttagaaaccgaaattgat
gcgacttttccaacctctcacattgatgaagcattaattcgtgaaacggtaaaacgattt
ttaggcgaaattgatcaaaaaccgcctattttctctgccataaaaaaagatggcgttcgc
ttgtacgaacatgcacgcgcaggagaaacgatcgaaattgcaagccgaaaaacaacgata
cacgaatttgaaattacgagaattgcactgccggaaatcgatttcagagttgtgtgcagc
aaaggaacttatattcgctcgctcgcttttgattttggaaaagcaatgaattcaggatca
cacttaacagtcttgcgtcgcacaaaaattggtgattacgacgtaaaagacgctatcgat
gttactttgtttgaggaaagtctcaaactgcaataa
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