Flavobacterium flavipigmentatum: LNP22_04495
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Entry
LNP22_04495 CDS
T10330
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ffv Flavobacterium flavipigmentatum
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffv03400
]
LNP22_04495 (radA)
DNA repair and recombination proteins [BR:
ffv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LNP22_04495 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Zn_ribbon_LapB
Lon_C
AAA
DUF7125
AAA_22
AAA_5
AAA_24
CobU
TniB
AAA_14
Rad51
AAA_16
NTPase_1
ABC_tran
nSTAND_NTPase5
Isochorismatase
AAA_18
RsgA_GTPase
DZR
NACHT
Motif
Other DBs
NCBI-ProteinID:
UFH39540
LinkDB
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Position
946915..948276
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AA seq
453 aa
AA seq
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MSKVKTSFFCQNCGTQYAKWQGQCNACKEWNTIAEEIIQKQEKVAWKSEPASSSKAPRPL
KINEIDSTQEVRMDTTDGELNRVLGGGIVPGSLTLLGGEPGIGKSTLLLQISLKLPYKTL
YVSGEESQKQIKMRAERITPNSDNCYILTETKTQNIFKQIEAIQPEIVIIDSIQTLHTDY
IESTAGSISQIRETTAELIKFAKETNIPVILIGHITKDGNIAGPKILEHMVDTVLQFEGD
RNHVYRILRSLKNRFGSTAELGIYEMLGSGLREVSNPSEILISHKDEEMSGTAIATTMEG
MRPLMIEIQSLVSTAVYGTPQRSTTGYNAKRLNMILAVLEKRAGFRLGAKDVFLNVTGGI
SVDDPAIDLAVVAAILSSNEDIPVTKGFCFAGEVGLSGEIRPVNRVDQRIQEAEKLGFNT
IFVSKYNKIALKNTGIKIELVTKIEDVASILFG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtaaaaacttcctttttttgtcagaattgcggcacccaatacgccaaatgg
caaggacaatgcaatgcctgcaaagaatggaatacgattgccgaagaaattatccaaaag
caagaaaaagtcgcttggaaaagcgaaccagcttccagcagcaaagcgcctcgcccatta
aaaattaacgaaatagattcgacgcaggaagtacgaatggatacaaccgatggcgaattg
aatcgtgttctgggtggcggaatcgttccgggatctttgactcttttaggcggtgaaccc
ggtattggaaaaagtacccttttgcttcagatttctctgaaattgccttataaaacgctt
tatgtttcgggtgaagaaagccagaaacaaattaagatgcgtgccgaaagaatcacgccc
aacagcgacaattgttatattttgacggaaacaaaaacgcaaaatattttcaagcaaatt
gaagccattcagcccgaaatagtgattatcgactctattcagactttacataccgattat
atagaatctaccgccggaagtatttctcagattagagaaactacggccgagttgatcaaa
tttgccaaagaaaccaatatcccagttattttaattggacatattaccaaagacggtaac
atcgccggcccgaaaattctggaacacatggtggatactgttttgcaatttgagggtgat
cgtaatcatgtgtatcgtattctgcgatcgctaaaaaaccgttttggctcaacagccgaa
ctgggaatttacgaaatgctgggcagtggtttacgggaagtttcaaacccgtctgaaata
ttgatttcgcacaaagacgaagaaatgtccggaactgcaattgccacaacgatggagggc
atgcgcccgttgatgatcgaaatacaatctctggtgagcaccgcagtttacggaacacca
caacgaagcacaacaggttacaacgccaaaaggctgaacatgattttggcggttttagaa
aaaagagccggatttcgtttaggcgcaaaagatgtgtttctaaatgttactggcggaatt
tcagtagatgatcccgcaattgacttagcggttgtcgctgccatattatcgtccaacgaa
gacattccggtaaccaaaggattctgttttgcgggagaagtaggtttatcgggagaaatt
cgccctgtaaaccgcgtcgatcagcgcattcaggaagccgaaaaattaggattcaacacg
atatttgtatccaaatacaacaaaattgcattaaaaaatacaggaatcaaaatagaactc
gttaccaaaattgaagacgtcgccagtattctttttgggtag
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