Flavobacterium flavipigmentatum: LNP22_04990
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Entry
LNP22_04990 CDS
T10330
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ffv Flavobacterium flavipigmentatum
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ffv01011
]
LNP22_04990
Enzymes [BR:
ffv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LNP22_04990
Peptidoglycan biosynthesis and degradation proteins [BR:
ffv01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LNP22_04990
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UFH39636
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All DBs
Position
complement(1048521..1050350)
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AA seq
609 aa
AA seq
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MIVRKISLAVSVLFSMSLVAQEVAHNEVTVKPEIKISYLDSVKSTFVKDNLATRVDSLWM
NELTSLDIYEDLTKDIQTINTDLSVNEELPTDLLKQRLQDMNEKSPFDIEYNQGLENIIK
SFLKNRRKSFSRLMALSEYYFPIFEDAFAKQNVPLEIKYLAVVESALNPKAVSRMGATGL
WQFMYGTGKQYDLKIDSYIDERSDPIRATAAASEYMKKMYAIFGDWELVLASYNSGPGNV
TKAIRRSGGKTKYWDIRNHLPRETQGYVPAFLATMYLFEYHKEHGINPERAVVKNFETDT
VRIKEKMTFKQIADLLDIPQSQLELLNPSYKLKVVPFYKDEQHFLRLPKDKIATFVSNED
KIYAYVQHDSGFRRMPTQLASRLAPKNKVIKTNQVQDFAQSTEFYKVRKGDNLGAIADKY
NVSVVDIKKWNNLKSNNIALGKTLKIRSTDTIKKSTDVKVIPIADKKDTQEAIAAADEKV
NTVTESKEYIVQAGDNLGSIAKKFDLTVAELKEWNNLNSNNIGLGKTLIVGKATEIANNQ
TTAVASNTVDSFKKKPISKNIGEEYFVKKGDSLYSISKKYPGVTISDIKKWNNIKDGDIK
PGMKLKING
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagaaaaatatcgttagcggtttctgttttattctcaatgtcattggtggcg
caagaagttgcccataatgaggttacggtaaagcctgaaattaaaatttcgtacctggat
tctgttaaaagcacgtttgtaaaagacaatttggctacccgtgtagacagtctatggatg
aatgagttaaccagtttagacatttacgaggatctgaccaaagacattcaaaccattaat
accgatttaagtgttaatgaagaattgccaacagacttgctcaagcaacgtcttcaggac
atgaatgagaaatcaccgtttgatatagaatacaaccaaggattagaaaacataataaag
tcgttcttaaaaaatcgtagaaagtcattttcgcgtttaatggctttatcagaatactac
tttcctatttttgaggatgcttttgccaagcaaaacgttccattagaaataaaatattta
gccgttgtagaatctgctttaaatcctaaagcagtttctagaatgggcgctactggactt
tggcagtttatgtacggtaccggaaaacaatatgatcttaaaatagattcgtatattgat
gagcgtagcgacccaattcgcgctactgctgctgcctcagaatacatgaaaaaaatgtac
gccatttttggtgactgggagttggttttagcatcttataattctggtccaggaaatgtt
accaaagcaattcgccgttctggcggaaaaaccaaatattgggacattcgcaaccatctt
ccaagagaaacacaaggatatgttcctgcttttttagccacaatgtatctttttgaatac
cacaaagaacatggaataaatcctgaaagagcggttgttaagaacttcgaaaccgatact
gttcgcatcaaagaaaaaatgactttcaaacaaattgctgatttgctggatataccacag
tcacagctggaacttctaaatccttcgtataaactaaaagtagtacctttctataaagac
gaacaacattttttacgtttgccaaaagataaaattgctactttcgtttctaacgaagat
aaaatttatgcttacgtacaacacgacagcggttttagaagaatgcccacacaattggct
tcaagattggcacctaaaaataaggtgattaaaacgaatcaggttcaggattttgctcaa
agtacagaattttataaggtgcgaaaaggcgacaacttgggcgccattgctgacaagtac
aatgtttcggtagtagatatcaaaaagtggaataatcttaaaagcaacaatattgcacta
ggaaaaacacttaaaattagatctacagataccatcaagaaatcaactgatgtaaaagta
attccgattgcagacaaaaaagatactcaagaagcaatcgctgccgcggatgaaaaagtt
aacaccgttactgagtctaaagaatacatcgtgcaagctggagacaatctgggcagtatt
gccaaaaaattcgatcttactgtagccgaattaaaagagtggaataacttaaactcaaac
aacattggtttagggaaaacgttaatagttggtaaagctaccgaaatagcaaacaatcag
actaccgcggttgcttcaaatactgttgattcattcaagaaaaaaccaatttctaaaaat
attggtgaagagtatttcgttaaaaaaggcgattcattatacagtatttcaaaaaaatac
cctggtgtgactatttcagatattaaaaagtggaacaacatcaaggatggcgatataaaa
cccggaatgaaacttaaaataaacggataa
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