KEGG   Flavobacterium flavipigmentatum: LNP22_06475
Entry
LNP22_06475       CDS       T10330                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ffv  Flavobacterium flavipigmentatum
Pathway
ffv03030  DNA replication
ffv03430  Mismatch repair
ffv03440  Homologous recombination
Brite
Enzymes [BR:ffv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LNP22_06475 (dnaE)
DNA replication proteins [BR:ffv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LNP22_06475 (dnaE)
DNA repair and recombination proteins [BR:ffv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LNP22_06475 (dnaE)
SSDB
Other DBs
NCBI-ProteinID: UFH39917
LinkDB
Position
1405043..1409581
AA seq 1512 aa
MYLIFDTETTGLPKRWDAPITDSDNWPRCIQIAWQLHDEMGKLIEHQDYLVKPDGFNIPY
DAERIHGISTELAEADGITLAEVLEKFNIALSKTKFIVGQNLGFDVNIMGAEFHRAGVES
PMSAMPVLDTCTEVTASLLKLPGGRGGKFKLPTLTELHSYLFNKPFAEAHNATADVEATT
RCFLELIRREIFTKEELDVPKDYFKEFQERNPQEFPLIGLKHINLKAASDKIREQLRALE
SVDKQTTVSDSDRADFKAAKYAHLHNHTQFSVLQSTIGIGNIVAATAKNGMPAVAMTDTG
NMMGAFHFVSAVMNHNKAASAKNKALVEAGEEPSETEMKPIVGCEFNVCDNHLDKSKKDN
GNQVVLLAKNKRGYHNLAKMSSIAFTDGFYYVPRIDRNVIQKYKEDIMVLSGNLYGEIPS
KILNIGENQAEEAVIWWKEQFGEDFYLEVMRHNQEDENRVNKTLIEFSQKHNVKLIATNN
TYYLNKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYYKSSEEMKKLFADIPE
AIINIQEIVDKVEIYSLYRDVLLPKFDIPEEFIVPEDEADGGVRGENKYLRHLTMVGAKK
RYGEISEAIQERLDFELLTISNSGYPGYFLIVQDFIAEARNMDVSVGPGRGSAAGSAVAY
CLGITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVINKYGKNQVAQIIT
YGKMATKSAIRDTARVLDLPLFEADRIAKLIPGMMPSKWNLARFISESEDEVKKALRSDE
FDNVKELIAIANEGDLAGETIQQAKILEGSMRNTGIHACGVIITPSDITNFVPVTTAKDS
DLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTVKLVKYRTGIDLNPDEFPIDDPETYE
LFQRGETVGIFQYESPGMQKYMKDLKPTVFGDLIAMNALYRPGPLEYIPSFVRRKNGEEE
IKYDLDACEEYLGETYGITVYQEQVMLLSQSLADFTKGEADVLRKAMGKKQKDVLDKMKP
KFVEQAAAKGHDAKILEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHFPAEYMAA
VLSNNMNDIKQVSFFMEECKRMGLQVLGPDVNESYYKFTVNDNYAVRFGMGAIKGVGSGA
VATIVENRKDGRYKSIFDLAKRIDLRAANKKAIENLALAGGFDSFEGTTRAQYFHDEGDG
VTFYEKAIRYGSKFQENENSSQVSLFGETSEVQIAEPIVPPCEDWSTMEKLAKEKEVVGI
YISGHPLDDFRFEMKYFCNARLEALKSMEQHVGKNLTFAGIINNVQHRVSKNGKGWAMFN
LEGYDESYEFRIFNEEYLKFRHFLIQNNFAHIKVLIKDGWVNHDTGKKSEPRLQFVEVKQ
LQDVLETFAKKLVVLLNIQDLKTEFIHKLSDLFSQNKGDNSVTFEIMELEKIKRLVAIET
TNDFTETEDAIFTEESENDEAIVGDTKIQEVNEVEEINVVTKLSMPSRRVKVKISQELLA
ELEKMQINFKLN
NT seq 4539 nt   +upstreamnt  +downstreamnt
atgtacttaatattcgatactgaaactactggattaccaaaacgttgggacgctccaata
accgattctgataactggcctcgctgtatccagatcgcctggcagttgcatgacgagatg
ggaaaattgattgagcatcaggattatttggtaaaacctgacggatttaatattccgtat
gacgcagaacgtattcacggaatttcgactgaattggctgaagccgatggaattacgctg
gccgaagttttggagaaattcaatattgctttaagcaaaaccaaatttattgtaggtcag
aatttaggttttgatgtgaatattatgggagccgaatttcatcgtgcgggagtggaatct
ccaatgagtgcgatgccagttttggacacctgtaccgaagtgacagcttcattattaaaa
ttgcctggaggtcgtggaggtaagtttaaattaccaactttaacagagttacatagttat
ctttttaataaacctttcgcggaagcgcacaacgcaacggccgatgttgaggcaaccacg
cgttgttttttggagttaattagaagagaaatttttaccaaagaagaactagatgttccg
aaggattattttaaggaatttcaagaaagaaatccacaggaatttccattaattggttta
aaacacatcaatttaaaagcggcttcggataaaatcagggagcagctgagagccttagaa
tctgttgacaaacaaactacggtttcagattctgacagagcagattttaaagcagcaaag
tacgcgcatttacacaatcatacgcagttttcggttttacaatcgactatcggaattggt
aatatcgttgcggctacggcaaaaaacggcatgccagcagttgccatgaccgatactgga
aatatgatgggggcttttcactttgtgagtgccgtaatgaatcataataaagcggcttct
gccaaaaataaagctttagttgaggcgggcgaagaaccttctgaaaccgagatgaagcca
attgtgggctgcgaatttaatgtttgtgacaaccatttagataaaagcaaaaaagacaat
ggtaatcaggttgtgttgttggccaaaaacaaaagaggttaccataatctggcaaaaatg
tcgtcaatcgcttttacagacgggttttattatgttccgaggattgatcgaaatgttatt
caaaaatataaggaagatatcatggtgttgtcgggaaatttatacggagaaattccgagt
aaaatcctaaacatcggtgaaaaccaggctgaagaagcggtaatttggtggaaagaacag
tttggcgaggatttttatctggaagtgatgcgtcacaatcaggaagatgaaaatcgtgta
aacaaaaccttgattgagttttcgcagaaacacaatgtcaaattaattgcgacaaacaat
acctattatttaaataaagaagacgccaatgcccacgatattttgttgtgtgtaaaagac
ggagaaaaacaggcaacgcctattggtcgtggtcgtggttatcgttacggattgcccaat
caggaatattattataagtcatcggaagagatgaaaaaactctttgccgatatacccgaa
gccattatcaatattcaggaaatagtagataaggtcgaaatttactcgctttatcgagat
gtattgcttccaaaatttgatattccggaggagtttatagttccagaagatgaagccgat
ggcggtgttcgcggggagaataaatatttgcgacacctgacaatggtgggggctaaaaaa
agatatggagagattagcgaagcgattcaggaacgtttggattttgagttattaacgatt
tcgaattcaggatacccgggttactttttgatcgttcaggattttatcgccgaagcccga
aatatggatgtttcggtaggtccaggccgtggttctgcggcgggttctgctgttgcttat
tgtttaggaattaccaatattgaccccattaagtacgacttgctttttgagcgtttcctg
aacccggatcgtgtgtcgatgcccgatattgatattgattttgatgatgaaggccgtggt
cgtgttatggattatgtaatcaataaatacggaaaaaatcaggtagcacagattatcacg
tatggtaaaatggcaaccaaatcggcgattcgtgatacggctcgtgtacttgatttgcct
ttgtttgaagccgatagaattgcaaaactgattccgggaatgatgccttccaaatggaat
ttggctcgttttatttctgaaagtgaagatgaggtaaaaaaagcacttcgatcggatgaa
tttgataatgtaaaagagctgatcgcaattgccaacgaaggtgatttggctggggagact
attcaacaggcaaaaatcctcgaaggatcaatgcgaaataccggaattcatgcctgtggg
gtaattattacgccatcagatattacgaatttcgttccggttacaaccgcaaaagattct
gatctgtatgtaacacagtttgataactcggttgcagaaagtgccggattgctaaaaatg
gatttcttgggtttgaagacccttaccttgataaaagatacggtaaaattagtaaaatac
agaaccggaatcgatctgaatccagatgaatttccaattgacgatccggaaacctacgaa
ctttttcagcgaggagaaacagtaggtatttttcagtatgagtcgcccggaatgcaaaaa
tacatgaaggatttgaaaccgactgtttttggagatttaattgccatgaatgcgttgtat
cgtccgggaccgttagaatatatcccgtctttcgttcgaagaaaaaatggcgaagaggaa
atcaaatacgatttggatgcctgcgaagaatacttgggagaaacctatggaattaccgtt
taccaagagcaggttatgcttttgtcgcaatcattggccgattttacaaaaggtgaggcc
gacgttttgcgtaaagcgatgggtaaaaagcaaaaggatgtcctggacaaaatgaaacct
aagtttgtagaacaagcggcagcaaaaggtcatgatgctaagattttagaaaaaatctgg
aaagactgggaggcttttgcaagttatgcttttaataaatcgcactctacttgttatgcc
tggattgcctatcaaacagcgtatttaaaagcgcatttccctgcagaatatatggctgcg
gttctttcaaataatatgaatgatatcaaacaggtgtccttttttatggaagaatgtaag
cgcatgggcttacaggttttaggccctgatgtcaatgagtcgtattataaatttacggta
aatgataattatgccgttcgttttggtatgggagcgatcaaaggagtaggttctggagcc
gtagccactatcgtcgagaacagaaaagacggtagatacaaatcgatttttgatttggca
aagcgaatagatttacgtgctgctaataaaaaagcaatcgaaaatttagcacttgcagga
ggatttgattcttttgaaggtactacaagagcacaatattttcatgatgagggcgacggt
gttactttttatgaaaaggctatacgttacggttctaaatttcaggaaaacgaaaattca
tctcaagtgagtttgtttggcgaaacaagtgaagtacaaattgcagaacctatagtgcct
ccgtgtgaagattggagcactatggaaaaacttgccaaagaaaaagaagtggtcggaatt
tatatctcgggacatccgttggatgattttagatttgaaatgaagtatttctgcaatgcc
agattagaggccctaaaaagtatggagcagcatgtgggtaaaaacttaacttttgcagga
attatcaataacgtacagcatcgtgtttcgaaaaacggaaaaggctgggctatgtttaat
ctcgaagggtatgatgaaagttatgagtttaggatttttaatgaagaatatctcaagttc
cgccatttcttgattcagaataattttgcacatataaaagtattgataaaagacggctgg
gtgaatcatgatacaggtaaaaaatcagagccgaggctgcaatttgttgaggtaaaacag
ctgcaggatgtcttggaaacttttgcgaaaaaattggttgttttgctgaatattcaagac
ctgaaaaccgaatttattcataaactaagtgatttgtttagccaaaacaaaggagataat
tcggtgacatttgaaattatggagctcgaaaaaattaagcgcttggttgccatagagacc
acaaatgattttacagaaacagaggatgccatttttacagaagaaagtgagaacgacgaa
gcaattgtaggagatactaaaattcaggaagtaaatgaggtagaggagattaatgttgtt
actaaactttctatgcctagtcgtagagtaaaagttaaaatctctcaagaattattagcc
gaattagaaaaaatgcaaatcaactttaaactcaactaa

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