Flavobacterium flavipigmentatum: LNP22_06515
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Entry
LNP22_06515 CDS
T10330
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
ffv Flavobacterium flavipigmentatum
Pathway
ffv00300
Lysine biosynthesis
ffv00470
D-Amino acid metabolism
ffv00550
Peptidoglycan biosynthesis
ffv01100
Metabolic pathways
ffv01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LNP22_06515
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LNP22_06515
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LNP22_06515
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LNP22_06515
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ffv01011
]
LNP22_06515
Enzymes [BR:
ffv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
LNP22_06515
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
LNP22_06515
Peptidoglycan biosynthesis and degradation proteins [BR:
ffv01011
]
Precursor biosynthesis
Amino acid ligase
LNP22_06515
Racemase
LNP22_06515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UFH39924
LinkDB
All DBs
Position
1418915..1421383
Genome browser
AA seq
822 aa
AA seq
DB search
MSLNSKNLIQILHAEWIGSKADVLIDNISIDSRSLQNGANTLFFALSGVNNDAHLYILDL
IEKGVQNFVVRHIPEDCAGKANFLVVNDTVTALQQFAGYYRNLFHFPIIGLTGSNGKTIV
KEWLNFLLSPDYNIIRSPKSYNSQVGVPLSVVAINEKHNLGIFEAGISTVDEMIKLENMI
KPNIGVLTNIGSAHDEGFLNLVQKIDEKLLLFKESEVIIYQKNEVVDSCLSQFSAEYMVN
SRVLFSWSFTDKNADVFILKKENKSDSTAIQYQYKGEKFDLEIPFLDSASVENSITCLLV
LLYLKYDFGTIQGRMQLLYPVEMRLAVKNGVHNCSVIDDSYSSDFQSLKIALDFLESQKK
NSKKTVILSDILQSGFSNEELYTKVAQLIAANKVSRIIGIGETISSFKEKFSNITTFQNT
ADFITHFESLAFANETILIKGARAFQFEEIVALLEEKTHETILEINLDSISHNLNFFKSK
LGQKIKIMVMVKAFGYGNGGLEIAKLLEHHKVDYLGVAFADEGISLKNGGIKLPIMVLNP
ESTSFPSIIQYHLEPEIYSVKGLNSFLKIAQEKKLKEYPIHIKLDTGMHRLGFEENNLDE
LVATLKGNTTVRIQSILSHMATSDEVKHYEFANSQIQLFEKLSSKLMNELNVKPIRHILN
TSGISNFPDAQYDMVRLGIGLYGVSNDAVEQKYLENVGTLKSVISQVRSIPAGDSVGYGR
RFMAQKITKIATIPIGYADGISRLWGNEVGYVMIKNQKAPIVGSICMDMLMVNVTEIDCK
EGDAVVIFGENPTVIEIAKALKTIPYEILTSISQRVKRVFFR
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgagcctaaattcaaaaaatcttatccaaattctccatgccgaatggatcggttctaaa
gcggatgttttgatagacaatatctctattgatagtcgttcgttgcaaaacggagccaat
actttgttttttgccttgtctggtgtcaataacgatgcgcatttatatattttggatctg
atagaaaaaggagttcagaattttgtcgttcgccatattccagaggattgtgcggggaaa
gccaattttttagtagtcaatgataccgtgaccgcgttgcagcaatttgcaggttattat
cgcaatctttttcacttccctattatcggattgactggaagcaatggcaaaacgatagta
aaagagtggcttaattttttactcagcccagattacaacattatcagaagcccaaaaagt
tacaattcgcaagtgggtgttccgctgtctgttgtggcaattaacgaaaaacacaattta
ggaatttttgaagccggaatttcaacggttgatgaaatgataaaacttgaaaacatgatc
aaacccaacatcggggttttgaccaatattggttctgctcatgatgaaggttttttgaat
ttagtacaaaaaatagacgaaaaactgcttttgttcaaagaaagtgaggttattatttat
cagaaaaacgaagtggtagattcttgtctgtcacaattttcggctgagtatatggtaaat
tcgagagtccttttttcgtggagttttacagataaaaatgcagatgtttttattctaaaa
aaagaaaataaaagtgacagcactgcaattcaataccaatataaaggagaaaagtttgat
ctcgaaattccgtttctggattcagcttcggtagaaaacagcattacttgtttgctggtt
ttgctttatttaaaatatgatttcggtacaattcagggcaggatgcaattgctgtatccg
gttgaaatgcgtttggctgtcaaaaatggggttcataattgtagtgttattgacgatagt
tatagttctgattttcagtcgttaaaaattgctttggactttttagaaagtcaaaaaaag
aattcaaaaaagacggtcattttatcagatattttacaaagcggattttcaaatgaagaa
ttgtacacaaaagtagcgcagttaatcgccgctaataaagtcagtagaatcatcgggatt
ggtgaaacaataagttcttttaaagagaaattttccaatatcacgacttttcaaaataca
gcagattttatcacgcattttgaaagtttggcatttgccaatgaaaccattttgataaaa
ggagccagagcgtttcaatttgaagaaattgtagcgttgctggaggagaaaactcatgaa
acgattttagaaattaatttagattcgatcagtcataatttaaatttttttaaatcaaaa
ttaggccaaaagattaaaataatggtcatggtaaaggctttcggttacggaaacggaggt
ttggaaatagccaaattattagaacatcataaagtagattatttgggtgtggctttcgcc
gatgagggaatttcgcttaaaaatggcggaataaagttgcctattatggtattaaatccc
gaatctaccagtttcccttcgattattcaatatcatttagaaccagaaatttacagtgta
aaaggtttgaattcgttcttgaaaatcgctcaggaaaaaaaattaaaagaatatccaatt
catataaaattagatacggggatgcatcgtttgggttttgaagaaaataatcttgacgaa
cttgtcgccactctaaaaggaaacactaccgttcgcattcagagtattttgtcgcacatg
gccacaagtgatgaggttaaacattatgagtttgcaaattcgcagattcaattgttcgaa
aaattatcttctaagttaatgaatgagctgaacgtaaaaccaattcgtcatattttgaat
acttccggaattagtaattttccagatgctcagtatgatatggtgcgtttaggaattggc
ttgtacggagtttcgaatgatgctgtagagcagaaatacctcgaaaatgtaggtacttta
aagtctgtaatttctcaggttcgttcgatccctgcaggagatagcgtagggtatggccgc
cgttttatggctcaaaaaatcactaaaattgccacgataccaattggttatgcagacgga
atatcacgtttgtggggtaatgaagtaggatatgtaatgataaaaaaccaaaaagcgccc
atagttgggagtatttgcatggatatgttgatggtgaatgttactgaaattgattgtaaa
gaaggagatgctgtcgttatttttggagaaaatccaacagttatcgaaatagccaaagct
ttaaaaacaattccgtatgaaatcttgaccagtatctctcagcgagttaaacgtgtattt
tttagataa
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