Flavobacterium flavipigmentatum: LNP22_06860
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Entry
LNP22_06860 CDS
T10330
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
ffv Flavobacterium flavipigmentatum
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ffv02000
]
LNP22_06860
Transporters [BR:
ffv02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LNP22_06860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
UFH39987
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Position
1492018..1493625
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AA seq
535 aa
AA seq
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MKISFKYISYFFLFILGLSMTLTSCTDDLNVTPKDDDEFLSETFFQDPASYKQVLAKLYA
GLYVGGNDGDGSADIAGLSGDFSSYLRLLFVTQEFTTDEAIIAWADGTLPTLNAQTWSPA
NEFLEGTFSRAFYHISVANEFLRQTTDEKLTARGVDATLKAEIATFRAEARFLRAFSYYN
LMDLFGNVPITTENDPVGFFYPAQKSRAEVFAFVESELKDLDNSLVASKTNEYGRVDKAA
AKFLLAQVYLNANVYVGTPKFNEAAALCKDIIDNSGYTFANVPYAYLFSADNNRNGAQSE
VIFPIVSDGNAIRATGAGMSFIMHASIGGSMDAASRGMDGGWQGIRTRREFVNLFSDETA
TADKRGTFYTAGQAKDIANVGTFTDGYAVTKYINKNADGSAAQRNDIPDIDFPMFRLTDA
YLMYAEATLRGATTGNITTALGYINQIRDRADAAPINTGQLTLDFILDERGRELFWECHR
RTDLIRFGKFTGGSKIWQWKGGSVNGSATESYRDLMPIPARNIQANPTLKQNPGY
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatcatttaaatatatatcttattttttcctattcattttaggattaagtatg
acgcttacttcgtgtaccgacgacctaaacgtgacgccaaaggatgatgatgagttttta
tctgaaaccttttttcaagatcccgcatcgtacaagcaagtattggcaaaattatatgca
ggtctttatgtaggaggaaatgatggagatggttctgcagatattgctggattgagtggg
gattttagtagttatttgcgtttgctttttgtaacacaggagtttactactgatgaagca
attatcgcttgggcggatggtactttaccaacattgaatgctcaaacttggtcgcctgca
aatgaatttctggaaggaacattttctagagctttttatcacattagtgttgctaatgag
tttttaagacaaactacagatgaaaaattaacggcaagaggtgttgatgctactttaaaa
gctgaaatcgctacttttagagctgaggctcgtttcttgagagcattttcatactataac
ttaatggatttgttcgggaatgtaccaatcactacagaaaatgatcctgtaggtttcttt
tacccagcacaaaaatccagagcagaagtttttgcttttgtagaatctgaattgaaagac
ttagacaatagcttagttgcttcaaaaacaaatgaatatggtagagtggataaagctgct
gctaaatttttattagctcaggtttatctgaatgctaatgtatatgtaggaacacctaaa
tttaatgaggctgcagcattatgcaaagatattattgataactctggttatacatttgct
aatgtaccttacgcctatttgttctctgcagataataatagaaacggtgcacaaagtgag
gtaatttttccaattgtaagtgatggtaatgctattagagctacaggcgcaggaatgagt
tttatcatgcacgcttctatcggaggtagtatggatgctgcttcacgcggtatggacggt
ggatggcaaggaattagaactcgtagagagtttgtgaatcttttttctgacgaaaccgca
actgctgataaaagaggtactttttatacagcaggtcaagcaaaagacatcgctaatgtt
ggaacatttacagacggttatgctgtaacaaaatacatcaacaaaaatgcagatggttct
gcagcacaaagaaatgatatcccggatatcgattttccaatgttcagattaacagatgct
tatttaatgtacgctgaagcaacacttagaggagctactacaggaaacataactacagct
ttgggttatatcaatcaaatcagagatagagcagatgctgcgccaatcaatactggacaa
ttaactcttgactttatcctagatgaaagagggagagaattattttgggaatgtcacaga
agaacagatttaattcgttttggaaaatttacaggcggatctaaaatctggcaatggaaa
ggcggttctgtaaatggaagtgcaacagaatcttacagagatttaatgcctattcctgca
agaaacattcaggcaaatccaactttgaaacaaaatccgggttactaa
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