Flavobacterium flavipigmentatum: LNP22_07105
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Entry
LNP22_07105 CDS
T10330
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ffv Flavobacterium flavipigmentatum
Pathway
ffv00550
Peptidoglycan biosynthesis
ffv01100
Metabolic pathways
ffv01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LNP22_07105 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LNP22_07105 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ffv01011
]
LNP22_07105 (mrdA)
Enzymes [BR:
ffv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LNP22_07105 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ffv01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LNP22_07105 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UFH40034
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All DBs
Position
complement(1548312..1550282)
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AA seq
656 aa
AA seq
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MRKILLPTLIIIAASLLVIRVFYLQVVDDSFATKSDNNAIKKQYDYPERGYIYDRYGKLL
VANQSSYDIMVIPREIKKDLNITEFCDLLKITKEEYQKRVAKATVYSPRLPSVFLSQLNK
SEFAAFQEKIRKYDGFYFQKRSLRDYEVDYGANIFGFITQVNERLIAKNPYYNSGDLIGK
QGVEESYEEVLRGIKGIKYIQKDKYNREIGSYKNGKYDTIAVQGEDITLTIDAELQKYGE
ELMINKRGGIVAIEPKTGEILALVTAPSYDPAILVGRKRSKNYTLLYHDSIAKPLYDRGL
LAEYPPGSPFKILTGLVALQEGVIDENIFTVSCHHGFSYARGRFMRCHCAGGQLQLHRAI
YQSCNSYFGTAYMKTINKYQSPSAAVDVWSNHLKTFGLGQFMGYDLPTGKKGKIPNSKTY
KQMYPNGGWRSTAIVSNAIGQGEVVMTPIQLANMMATIANQGYYFTPHIIKKIESKKIDP
KFSTKHTTSIDKKYFPPIISGLFDVYNMGTASRLKVEGIDICGKTGTAENYTKINGVRTK
LKDHSIFVAFAPKDNPKIAIAIMIENGGFGATVAGPIASLMIEKYLKKKISRTDLEIRVL
NKSLKEEYAKLGGISAAEAIESTPKDSILKAKIIVPKKITPKAEIKKTTVDTTKDN
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaattctgctgcccactttaattataattgcagcatctctgctagtaattcga
gtgttttatttgcaagttgtagatgactcttttgcgaccaaatcagataataatgccatc
aaaaagcaatacgattatcctgaaagaggctacatctatgatcgctatggaaaattattg
gtagccaatcagtcctcttatgatatcatggttattcctagagagatcaagaaagacctt
aatattactgaattttgcgacttattaaaaatcactaaagaagaatatcaaaaaagagtc
gcaaaagctactgtttatagtccacgattaccttctgtttttttatcacagttaaacaaa
agtgaatttgctgcttttcaggaaaaaatcagaaaatacgatggtttttatttccaaaaa
cgttcccttcgtgattatgaagtagattacggtgctaatatttttggcttcatcacccag
gtgaatgagcgtttaattgccaaaaacccttattacaatagtggcgacttaatcggaaaa
caaggtgtcgaagaaagctatgaagaagtactacgcggaattaaaggaataaaatacatt
caaaaagacaaatataaccgcgaaattggttcgtataaaaacggaaaatacgatacaata
gcagtacaaggggaagacatcacactgactatcgatgctgaacttcaaaaatatggggaa
gaattaatgatcaataagcgaggtggaattgtagctatcgaacctaaaacaggcgaaatt
ttagcacttgtaacagctccttcttacgatcccgctattttggtaggaagaaagcgctct
aaaaattatacacttttatatcacgattctatcgcaaaaccattgtatgacagaggactt
ttggcggaatatcctcctggatcccctttcaaaatcctgactggtttagttgctttacaa
gagggagttatcgatgaaaatattttcacagtctcttgtcatcacggatttagctatgcg
agaggccgatttatgagatgccactgtgccggaggtcaattgcaattgcatagagctatt
tatcaatcatgtaacagttattttggaactgcatatatgaaaacgattaacaaataccaa
agtccaagtgcggcggtagatgtatggagcaatcacctaaaaacttttggtttgggacaa
ttcatgggttatgatttaccgacaggaaaaaaaggaaaaataccaaactccaaaacctat
aaacaaatgtatcctaatggaggctggagaagtactgcaattgtgtcaaatgctattggt
cagggcgaagttgtaatgacacctatacaattggccaacatgatggcaacaattgccaat
cagggttattattttacacctcatatcatcaaaaaaattgaaagtaaaaaaatagatcca
aagttttccacaaagcacacaacaagtatcgacaaaaaatatttccctccaatcattagc
gggttatttgatgtttataatatgggaactgccagcagacttaaagttgaaggtattgat
atttgtggtaaaaccggaacggcggagaactatacaaaaattaatggtgttagaacaaaa
cttaaagatcactcgatatttgtagcttttgcccctaaggataatccaaaaattgccatt
gccattatgatcgaaaatggaggatttggagctactgttgcaggaccaatcgctagcttg
atgattgaaaaatatctaaaaaagaaaatatcaagaacagatttagagattagagttttg
aataaaagcttaaaggaagaatatgctaaattaggcggaatcagtgcagcagaggcaatt
gaatctactcctaaagattctattcttaaagcaaaaataatagttccaaaaaagatcaca
ccaaaagcagaaatcaaaaaaacaactgtagatactactaaagacaattaa
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